Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4134g00011 ATGGACCTTGCTATCACCAAGTGCACTGGGGAGACACATGCCAATTTGGCTGCAGTAATTACTCGCTACGCAGAGACTCTAAATCAGTACAATTTGCGCAGCTTGGGCTACCCCGCTAACCAGTATTTCAACTATGATGCATTAGCACCGTTGCTTCATTTTCACCTCAACAATGCTGGTGACCCATTTGTTGGGAACGGCTATGCTCTAAATTCAGCAGCATTTGAAGTTTGCGTGCTTGATTGGTTTGCAAACTTGTGGGAGATAGAGAAGGGTGATTACTGGGGATATGTCACAACTGGTGGAACTGAAGGCAATCTTCACGGGATTTTATTAGGGAGAGAACAATTTCCAGATGGGATTTTATATACCTCACAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAGTGCGTGAAGGTTGGCACTTTCGTTTCTGGTGAGATTGATTGTGCTGAACTAAAGGTTTCATTACTAGCTCACAAGGACAAGCCAGCCATCATCAATCTAAACATAGGGACAACTATGAAGGGAGGTGTTGATGATCTTGATCGTGTAATACAAACACTTGAGGAATGTGGTTTCACTCGTGATCGATTTTACATTCACTGTGATGGTGCCCTATTTGGAATGATGTTGCCCTTTATTGAACGGGCACCAAGGATTACCTTCAAGAAACCCATTGGAAGTGTAGCTATTTCAGGTCATAAGTTCTTGGGGTGCCCAATTCCTTGTGGTGTTGTAATAACTCGCTTACAACAGGTCAATGCCCTATCTAGTGATGTTGAATACATTGCTTCAAGGGATGTCACAATCACAGGTAGCCGTAGCGGGCATGCTCCAATCTTCCTCTGGTATGCTCTCCAAAAAAGAGGTTTAATAGGACTCAAGAAAGAAGTGCAGATGTGTATCAAGAATGCACGTCACTTAGTGGATCAACTACGTGATGGTGGCATTGGTGCAATGTTGAATGAATTTAGTAATACAGTTGTCTTTGAAAGGCCTCTAGATGATGACTTTACGCGTAGGTGGAGTTTGGCTTGCGATGGAAATATTGCACATGTGGTGGTGATGCAACACATTACCATTGAAATGTTGGACTCCTTTGTTAGCGAATTTCTTAAAAAACGATCCATTCCGTTCAAAGATGGACGGTTTCCACCTCTATGCATTGCAAATGATGTTGGTTCTGAAAATTGTGCATGTTCTATATGCACAAAACATTATGATGATTGA 1251 0.4189 MDLAITKCTGETHANLAAVITRYAETLNQYNLRSLGYPANQYFNYDALAPLLHFHLNNAGDPFVGNGYALNSAAFEVCVLDWFANLWEIEKGDYWGYVTTGGTEGNLHGILLGREQFPDGILYTSQDSHYSIFKIARMYRMQCVKVGTFVSGEIDCAELKVSLLAHKDKPAIINLNIGTTMKGGVDDLDRVIQTLEECGFTRDRFYIHCDGALFGMMLPFIERAPRITFKKPIGSVAISGHKFLGCPIPCGVVITRLQQVNALSSDVEYIASRDVTITGSRSGHAPIFLWYALQKRGLIGLKKEVQMCIKNARHLVDQLRDGGIGAMLNEFSNTVVFERPLDDDFTRRWSLACDGNIAHVVVMQHITIEMLDSFVSEFLKKRSIPFKDGRFPPLCIANDVGSENCACSICTKHYDD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4134g00011 416 PANTHER - 6 409 - -
Gabi4134g00011 416 Pfam Pyridoxal-dependent decarboxylase conserved domain 76 324 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gabi4134g00011 416 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 235 256 IPR021115 GO:0016831
Gabi4134g00011 416 SUPERFAMILY PLP-dependent transferases 37 378 IPR015424 -
Gabi4134g00011 416 Gene3D - 52 293 IPR015421 GO:0003824
Gabi4134g00011 416 Gene3D Aspartate Aminotransferase, domain 1 294 382 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4134g00011 Gabi-Chr4134 206372 209356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4134g00011 177 311 Calmodulin-binding Proteins AT1G65960 27.778 3.71e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4134g00011 K25193 - gmx:100781665 695.656