Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4134g00008 ATGGAGAAGAACGTGGCAATGTCATTAATTATTCCAGCAGTTCCTGCCACAGAGCGGCTACCTAGGGTGGTCAGTAAAACCAAGCCCTCTAGAGAAGAAGAGAAGCAGAGAGAAATTCTAGAGAATACTGGACAAATGAGCCTTGCTGTCACCAAGTGCACCGGGGAGACACAGCCCAATTTGGCTGAAGTAATTAGTCATCAGTACGTGGGGACACTAAATCAAAAGAAACTGCACTTTTTGGGCTACCCCACTAATCAGGACTTGGACTATGATGCATTGGTACCATTGTTGCAATTTCACCTAAACAATGCTGGGGATCCTTTTAGAGGGAGCAGTTTTGGTCTAAATTCAACAGAATTTGAAGTTTGCGTGCTTGATTGGTTTGCTAACCTGTGGGAGATAGAGAAGGGTGAGTATTGGGGATACGTCACAACTGGTGGGACTGAAGGAAATCTTCATGGAATTTTACTGGGGAGGGAAAAATTTCCAGATGGGATTCTATATACCTCACAGGATTCCCATTATTCAATATTCAAAATAGCAAGAATGTATAGAATGCAATGCGTGAAGGTTGGCACCTTGGTCTCGGGTGAGATCGATTGTGTTCATCTAAAGGCTTTACTTCTTGCTCACAAGGACAAACCAGCCATCATCAATCTAAACATAGGAACAACTATGAAAGGAGCTGTTGATGACGTTGATCTCGTATTACAAACACTTGAGGAAAGTGGCTTCCCTCGTGAACGATTCTATATTCATTGTGATGGAGCTCTAATCGGAATGATGCTGCCCTTTCTTAAACAAGCTCCCAGGACTACCTTCAAGAAGCCTATCGGAAGTATAACCATTTCTGGCCATAAGTTTTTGGGATGCCCAATTCCTTGTGGTGTTGTAATGACTCGTTTAGAACACACCAATGTCCTATTCAGAGATGTTGAAGTGATCGCTTCTAGGGATGCCACAATCACAGGTAGCAGAAGTGGGCATGCTCCAATCTTCATATGGTATGCTCTTAAAAAAAGAGGTTTATTAGGACTCCAGAATGAAGTGCAGAAGTGCATGATGAATGCACGTTACTTAGTGGATCAACTTCGTGATGCTGGAATTGGTACAATGTTGAATGAGTTTAGCAGTACGGTTGTCTTTGAGAGGCCTTTAGATGATGACTTTGCCCGTAAGTGGAATTTAGCATGCAATGGAAATATTGCACATGTGGTGGTGATGCAGCACGTTACTATTGAAATGTTGGACTCCTTTGTTAGTGAATTTATTCAAAAACGATCCATTTGGTTCCAAGATGGACTGAGAAAGCCTCTATGCCTTGCAGACGACATTGGTGCTGGAAATTGTTCTTGTATATTGCATAATCAGTGGCGGAGGCATGTATGA 1392 0.4253 MEKNVAMSLIIPAVPATERLPRVVSKTKPSREEEKQREILENTGQMSLAVTKCTGETQPNLAEVISHQYVGTLNQKKLHFLGYPTNQDLDYDALVPLLQFHLNNAGDPFRGSSFGLNSTEFEVCVLDWFANLWEIEKGEYWGYVTTGGTEGNLHGILLGREKFPDGILYTSQDSHYSIFKIARMYRMQCVKVGTLVSGEIDCVHLKALLLAHKDKPAIINLNIGTTMKGAVDDVDLVLQTLEESGFPRERFYIHCDGALIGMMLPFLKQAPRTTFKKPIGSITISGHKFLGCPIPCGVVMTRLEHTNVLFRDVEVIASRDATITGSRSGHAPIFIWYALKKRGLLGLQNEVQKCMMNARYLVDQLRDAGIGTMLNEFSSTVVFERPLDDDFARKWNLACNGNIAHVVVMQHVTIEMLDSFVSEFIQKRSIWFQDGLRKPLCLADDIGAGNCSCILHNQWRRHV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4134g00008 463 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 281 302 IPR021115 GO:0016831
Gabi4134g00008 463 Gene3D - 98 338 IPR015421 GO:0003824
Gabi4134g00008 463 PANTHER - 31 457 - -
Gabi4134g00008 463 Pfam Pyridoxal-dependent decarboxylase conserved domain 118 378 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gabi4134g00008 463 SUPERFAMILY PLP-dependent transferases 77 425 IPR015424 -
Gabi4134g00008 463 Gene3D Aspartate Aminotransferase, domain 1 339 428 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4134g00008 Gabi-Chr4134 84303 87651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4134g00008 223 369 Calmodulin-binding Proteins AT3G17760 28.571 2.22e-07 51.2