Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4134g00005 ATGGGTAGGAAGAAGCCGACAGCACGGGACGAAGAGAACCCATCGCAGCAGGGCGGTGGGAAATCGAAGAAGAAGGGGGCCGTAATCGACGACGACGAGTACTCTATCGGAACCGAGCTTTCGGAGGAGCCGCCACCACTGGCGCCGGAAGAGAAGGGGAAGAAGAAAGGTAAAAAGGGTAATGCTAAATCTGCTGAAAATGATGATAATGTTGTTGATGATGATGAAGATGTGCCAGAAGCTGACTTTGCTGGGAAGAAGAAGGGGAAATCAAAAAAGGGTGGTGGGAGTAATATATTCGCTGGTTCCGGCTTTGGTTTGCTTGGTGATGATGAGGATGGTGATGATGATGATGATGAAGTAGCCAGTGAGCGAGATGGTGAGGAGGAGGATGAACCTGTGGATAGTTTTTCGGGTAAGAAGAAGCCCTCCAAGGGTTCGAAGAAAGCCAGTGGTAGTTTGTTGAATGCACCCGATATTGATGAGAATGATGATGTTGATGAACCCGATATTTCTTTTCACGGGAAGAAAAAGTCTTCGAAAAGAAGCAAGAAGGGTGGTGCTTTATTTTCAGGTGCTAGTTCTGGTGAGATTGATGATGGAGAGGAGACCAAGAATGAAAAGGAAGATGAAGATGATGAAGACATGGGATCCAGCACTTTCTCAGGTAAGAAAAAGAAGTCATCGAAGTCTTCAAAAAAGGCTATTAATACACCTAGTACAACTTTGGCTGATGAGGATGATGTTTCGGTAACTGAGTCTGCTAGAGGTGGTGATGACAAGAATGAGGATGATGATTCTTTATTTGCATTTTCTGGTAAAAAGAAGTCTTCTAAAAAGAAAAGCAGTAGTAATACTGCCAAAGTGAGTGATGAAATTGGGCTTGGAAATGAAAGTGTAGAAGTTGTTGAGCCTGAGCAACCTAGTGTTGGTATTAGTAATACTGTTGCTGACAAAGTCAATGTAAATAAGAGTGAAGAGGTCACTGAAACTTCCAAAAATAAGAAAAAGAATAAGAAGAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTAGACAAGATTCTTGCAGAGCTTGGTGAGGCACCTCCTATGGCAAAACCTGCTGCTCCTCCACTGCAGGATGATAAAGTTCAGCCTACTCCTGAAGTAGGTTCTGCTGCTGATGCTTCAGGAGAAAAGGAGGGGGAAGAGGAGAGTGTAGAGTCAGCTGCTGCAAAGAAGAAGAAAAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCGGCGGCGGCTGCAGCAGCCACCGGAAGTGTACCAGAAAATGAAACAGAAGAAATTAAAACTGAGACAATTGAATCAAAGAAGAATGAGTCGAAGACTAAAGCAGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAGGAGGCACTGGCTCGAAGAAAAGAGGCTGAAGAAAGGAAGAAAAAAGAAGAGGAGGAGAGATTAAGGAAGGAAGAAGAGGAACGGCGTAGGCAAGAGGAACTTGAGAGACAGGCTGAAGAGGCTAGACGCAGAAAGAAGGAAAGAGAAAAGGAGAAACTCCAGAAAAAGAAGCAAGAAGGTAAACTGTTAACTGGTAAGCAAAAAGAAGAAGCTCGTCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACAGGCGGCGTGACTCTTCCTGGGGATTCCAATGCTCCAGCCAAAAAGCCCATATATCAGACAAAGAAGCCAAAACCAACCCATCGTAATCAGAATGGTGCTGCTGCTGTTCAGACAACTGAAAGTGTAGAAGCAAAGGAGGCTACCACTGATGTGGTTCCAGAGGAACCAGAAAAGGTTGAAGAAGTGGAGTCAGTGCAGGTGGAGGACAAAGTTGAACCTCCGGAAGTAGTTGAAGAGGATGGAGTGGAAGAAGATGATGTAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAAGGTGCATTTGCAGATGAAGAGGCTGACTCAGAGCCTGAACCAATTGTCAGAAAGGAGATTAAAAATGCTGTAGCTAGTCACAATGCTGGTGCTACTAATAAAACTGTTTCTAAGCCTGTGGCTGAAGATATTGAAGATAGATCACAGTCTAATGTAGACAAAAATAGAAAGCATAATCCAGACTCGAAAAAGGGACTGCCAAAGTCTTCTGTGCCTTCTAAGCCAAATGATGAGAACCTCCGCTCCCCAATCTGCTGTATCATGGGGCACGTGGACACCGGAAAAACCAAGCTGCTGGATTGTATTCGGGGTACTAATGTTCAGGAGGGTGAGGCTGGTGGTATCACACAACAGATTGGTGCAACATACTTTCCTGCTGAGAACATTCGTGATAGAACAAAGGAACTTAAAGCTGATGCAAAGCTGAAAGTTCCTGGTCTACTGGTTATTGATACCCCTGGGCACGAATCATTTACTAACTTAAGGTCTCGGGGTTCAGGTCTATGTGATATCGCAATTTTGGTTGTTGACATTATGCATGGCTTAGAGCCACAAACAATAGAATCACTCAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGCCGCAACTCTCCAATTGTTAAAGCAATGAAGCAGCAGTCAAAGGATGTGCAGAATGAGTTTAATATGAGGCTCACTCAGATTATTACTCAATTCAAGGAACAAGGGCTAAATACTGAGTTGTATTATAAAAATAAAGAAATGGGAGAAACGTTCAGCATTGTGCCTACGAGTGCAATAAGTGGTGAAGGAATCCCAGATATGTTATTACTATTGGTTCAGTGGACCCAAAAAACAATGGTTGAGAAACTTACATACAGTGAAGAAGTGCAGTGTACTGTTTTGGAGGTCAAAGTTATTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGATCAAATAGTTGTCTGTGGAATGCAGGGGCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAAGAGCTCCGTGTTAAGGGAACTTATATCCATCACAAACAAATCAAAGCTGCAATGGGTATAAAGATTACTGCCCAGGGGCTTGAACATGCTATAGCTGGCACTGGTTTATATGTGGTGAACCCTGATGATGATTTGGAAGATGTTAAAGAAGCAACAATGGAAGATATGCGGTCAGTCATGAGCAGGATTGACAGGAGCGGAGAGGGTGTTTGTGTACAGGCATCTACCCTTGGCTCCTTGGAGGCATTACTGGAATTTTTGAAAACTCCTGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTACATAAAAAGGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGACACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACTCCTGAGGCTAGAGAACTTGCAGATGAATTGGGTGTGAAAATTTTCATCGCTGATATCATTTATCATCTGTTTGATCAATTTAAGGCTTATATTGACAACATTAAGGAGGAGAAAAAGAGAGAAGCTGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATCTTACCGAATTGCATTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATATACTTGAAGGCATTGCAAAGGTTGGGACTCCTATTTGTATTCCTTCCAGAGAGTTCATTGATATTGGTCGCATTGCTTCGATTGAGAACAACCATAAACCTGTTGATTCTGCGAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAACTCCGAGGAGCAACAAAAAATGTATGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATGTTTCACGGAGATCTATTGATATACTCAAAACTAATTATCGGGATGATCTTAATATGGAGGAATGGAGGTTGGTTGTGAAATTGAAGAATCTTTTCAAGATACAATGA 3990 0.4248 MGRKKPTARDEENPSQQGGGKSKKKGAVIDDDEYSIGTELSEEPPPLAPEEKGKKKGKKGNAKSAENDDNVVDDDEDVPEADFAGKKKGKSKKGGGSNIFAGSGFGLLGDDEDGDDDDDEVASERDGEEEDEPVDSFSGKKKPSKGSKKASGSLLNAPDIDENDDVDEPDISFHGKKKSSKRSKKGGALFSGASSGEIDDGEETKNEKEDEDDEDMGSSTFSGKKKKSSKSSKKAINTPSTTLADEDDVSVTESARGGDDKNEDDDSLFAFSGKKKSSKKKSSSNTAKVSDEIGLGNESVEVVEPEQPSVGISNTVADKVNVNKSEEVTETSKNKKKNKKKSGRTAQEEEDLDKILAELGEAPPMAKPAAPPLQDDKVQPTPEVGSAADASGEKEGEEESVESAAAKKKKKKKEKEKEKKAAAAAAATGSVPENETEEIKTETIESKKNESKTKAADKKVPKHVREMQEALARRKEAEERKKKEEEERLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGVTLPGDSNAPAKKPIYQTKKPKPTHRNQNGAAAVQTTESVEAKEATTDVVPEEPEKVEEVESVQVEDKVEPPEVVEEDGVEEDDVEDEWDAKSWDDVNLNAKGAFADEEADSEPEPIVRKEIKNAVASHNAGATNKTVSKPVAEDIEDRSQSNVDKNRKHNPDSKKGLPKSSVPSKPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRDRTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKAMKQQSKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMVEKLTYSEEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYIHHKQIKAAMGIKITAQGLEHAIAGTGLYVVNPDDDLEDVKEATMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKTREYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKREAADEAVFPCVLKILPNCIFNKKDPIVLGVDILEGIAKVGTPICIPSREFIDIGRIASIENNHKPVDSAKKGQKVAIKIVGSNSEEQQKMYGRHFEIDDELVSHVSRRSIDILKTNYRDDLNMEEWRLVVKLKNLFKIQ 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4134g00005 1329 CDD IF2_aeIF5B_IV 1200 1295 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 626 646 - -
Gabi4134g00005 1329 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 737 953 IPR000795 GO:0003924|GO:0005525
Gabi4134g00005 1329 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 276 1325 IPR015760 -
Gabi4134g00005 1329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 736 1028 IPR027417 -
Gabi4134g00005 1329 SUPERFAMILY Translation proteins 1196 1328 IPR009000 -
Gabi4134g00005 1329 FunFam eukaryotic translation initiation factor 5B 960 1079 - -
Gabi4134g00005 1329 PRINTS GTP-binding elongation factor signature 857 866 IPR000795 GO:0003924|GO:0005525
Gabi4134g00005 1329 PRINTS GTP-binding elongation factor signature 741 754 IPR000795 GO:0003924|GO:0005525
Gabi4134g00005 1329 PRINTS GTP-binding elongation factor signature 805 815 IPR000795 GO:0003924|GO:0005525
Gabi4134g00005 1329 PRINTS GTP-binding elongation factor signature 821 832 IPR000795 GO:0003924|GO:0005525
Gabi4134g00005 1329 FunFam Eukaryotic translation initiation factor 5B 1192 1329 - -
Gabi4134g00005 1329 Coils Coil 460 531 - -
Gabi4134g00005 1329 FunFam Eukaryotic translation initiation factor 5B 731 959 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 680 736 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 600 625 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 109 133 - -
Gabi4134g00005 1329 Pfam Translation-initiation factor 2 1063 1178 IPR023115 -
Gabi4134g00005 1329 Pfam Elongation factor Tu domain 2 976 1051 IPR004161 GO:0005525
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 390 409 - -
Gabi4134g00005 1329 Gene3D Translation factors 1192 1329 - -
Gabi4134g00005 1329 NCBIfam small GTP-binding protein domain 742 867 IPR005225 GO:0005525
Gabi4134g00005 1329 Coils Coil 394 426 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 435 545 - -
Gabi4134g00005 1329 Gene3D - 1081 1185 IPR036925 -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 45 68 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 308 322 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 696 721 - -
Gabi4134g00005 1329 Gene3D Translation factors 960 1080 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 576 598 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 342 357 - -
Gabi4134g00005 1329 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1062 1191 IPR036925 -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 249 273 - -
Gabi4134g00005 1329 FunFam Eukaryotic translation initiation factor 5B 1079 1185 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 1 651 - -
Gabi4134g00005 1329 MobiDBLite consensus disorder prediction 233 248 - -
Gabi4134g00005 1329 CDD aeIF5B_II 961 1071 - -
Gabi4134g00005 1329 CDD IF2_eIF5B 740 950 - -
Gabi4134g00005 1329 Pfam Elongation factor Tu GTP binding domain 741 949 IPR000795 GO:0003924|GO:0005525
Gabi4134g00005 1329 Gene3D - 731 959 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4134g00005 Gabi-Chr4134 41140 52566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4134g00005 309 1329 Eukaryotic Initiation Factors Gene Family AT1G76810 69.209 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4134g00005 K03243 - gmx:100814875 1623.22