Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4128g00002 ATGGTGATAGAGATTGTGGAGCCTAACACTTGCATTAGGGGTTGCTGCACCAGCTCCTCTATTCCTCTGCATCTCCCTCCTTCCTCTTATACTCTTCTCTCACCAATTGCCCGAGGGGCCGAGAGTGTTGTTTATGAAGGGACTTTGGATGGCAAGAAGGTTGCTGTGAAGAAACCCATCTTGTCAATTTCAGAAGATATTAATAAGTTTCATAAAGAATTGCAATTGCTTTGCAAGCTAGATCACCCAGGAATAGCAACACTAATCGCCGCCCATGCAAAGCCACCCAATTACATGTTTTTCTTCAAGTTGTATGAATCTGCGAATCTTGCACAGAAGTTACATGTGGAGGAATGGATCCCGACTATCAATCATGCCCTTATGATAACAATGCAGTTAGCATTGGCTTTGCAATATCTGCATAACCTCGGGATTGTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACGAAAATCTTCGTCCCCACCTTACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAAGGAGTTTCCCTTGAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGGAAGGAGCTACATACAGAAAAATCAGATGTGTACAGTTTTGGGGTATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACCGAGCAGCAACTAACAGCGGCTGTTGTTTCAGATGGATTACGACCAGTCCTTGCTACTGAGGAGTTGGGTATACCATCAAGATTATTGTCAATGATACAAAAGTGCTGGGATACAAATCCTAAAAGAAGACCTTCCTTTGATGATATTGTCAAGGAGCTTGATTTTATAATGGAGCACAGGACGACAAAGAAGGCAGAAGATATGCATATCAGACCTTGCAACTTGCATGTTGATCAACTTGTGGATGAGACCAGTTACCTTCCTGCTTGTCAAGAGAGTATTAACTGGTCCACTCAAGGTGAACTTTTTGCCAGGAGTTCCTCTAGTGCCACTGATTCTTGTTTGAGAACATGGCGTGAGTCTTATGACGACCCTTTAGTATACCATCCAACACTCTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGACACACATTTCGTTCTGCCCCATATTTGCAATGAAAATGATGTCTATGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCAGTTTTGCAAACTTTAGATTTTATCGGAAGCCCTGCTAATGCACTAGTGGAAGCATTCCTTAAGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCTTTCGTAAAACCAACAGATGTATGCAGAAGGATTGGCATCCTGGTTGTACTGCAATTGCTGCTCTTGTAGTCAGGAACAAGCTATTTGTTGCTAACATCGGTGATTGCAGGGCAATCTTATGTCGCGCTGGTAACTCCATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTGAAGAGAGAGAGCGCGTTATTCGTCATGGGGGCCACGTACATTGGCAAGTTGATACCTGGAGAGTCGGCCTTCCAGCGCTTCAGGTTACTCGTTCTATTGGTGATGATGATCTGAAGCCCGCTGTAACTGCAGAACCTGAGATTGCCGAGAGTACCTTATGTGCTGAGGATGAATTTCTGGTCATGGCTAGTGATGGTCTCTGGGATGTCATAAGCAGTATGGACGTTATAAATATAATAAAAAACACTGTTAAAGAGCCTGGAATGTGCTCTAAGAGGTTGGCTACAGAAGCAGTGGAACGTGGTAGCAAAGACAACATTACAGTTATTGTCGTTTTTTTACGCCCTGTATCCACAGCAGAGAGAATTTATTAG 1977 0.4315 MVIEIVEPNTCIRGCCTSSSIPLHLPPSSYTLLSPIARGAESVVYEGTLDGKKVAVKKPILSISEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESANLAQKLHVEEWIPTINHALMITMQLALALQYLHNLGIVHRDVKPANILLDENLRPHLTDFGLAEYKNDLKGVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVSINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLATEELGIPSRLLSMIQKCWDTNPKRRPSFDDIVKELDFIMEHRTTKKAEDMHIRPCNLHVDQLVDETSYLPACQESINWSTQGELFARSSSSATDSCLRTWRESYDDPLVYHPTLSWGSYATCGRRETMEDTHFVLPHICNENDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTLDFIGSPANALVEAFLKTDAAFRKELDSFRKTNRCMQKDWHPGCTAIAALVVRNKLFVANIGDCRAILCRAGNSIALSKDHVASCLEERERVIRHGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEIAESTLCAEDEFLVMASDGLWDVISSMDVINIIKNTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4128g00002 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Gabi4128g00002 658 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4128g00002 658 Gene3D Transferase(Phosphotransferase) domain 1 20 338 - -
Gabi4128g00002 658 Gene3D - 384 653 IPR036457 -
Gabi4128g00002 658 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 383 652 - -
Gabi4128g00002 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Gabi4128g00002 658 CDD PP2Cc 393 648 IPR001932 -
Gabi4128g00002 658 FunFam Protein kinase and PP2C-like domain-containing protein 20 344 - -
Gabi4128g00002 658 SUPERFAMILY Protein kinase-like (PK-like) 22 335 IPR011009 -
Gabi4128g00002 658 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4128g00002 658 Pfam Protein phosphatase 2C 396 641 IPR001932 -
Gabi4128g00002 658 SMART PP2C_4 381 646 IPR001932 -
Gabi4128g00002 658 Pfam Protein kinase domain 30 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4128g00002 658 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 314 - -
Gabi4128g00002 658 SUPERFAMILY PP2C-like 385 650 IPR036457 -
Gabi4128g00002 658 SMART PP2C_SIG_2 406 648 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4128g00002 Gabi-Chr4128 16336 27757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4128g00002 99 658 PP2C-type Phosphatase Gene Family AT2G40860 64.706 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Gabi4128g00002 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4128g00002 - - gmx:100785390 1157.51