Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4128g00001 ATGGTGATAGAGATTGTGGAGCCTAACACTTGCATTAGGGGTTGCTGCACCAGCTCCTCTATTCCTCTGCATCTCCCTCCTTCCTCTTATACTCTTCTCTCACCAATTGCCCGAGGGGCCGAGAGTGTTGTTTATGAAGGGACTTTGGATGGCAAGAAGGTTGCTGTGAAGAAACCCATCTTGTCAATTTCAGAAGATATTAATAAGTTTCATAAAGAATTGCAATTGCTTTGCAAGCTAGATCACCCAGGAATAGCAACACTAATCGCCGCCCATGCAAAGCCACCCAATTACATGTTTTTCTTCAAGTTGTATGAATCTGCGAATCTTGCACAGAAGTTACATGTGGAGGAATGGATCCCGACTATCAATCATGCCCTTATGATAACAATGCAGTTAGCATTGGCTTTGCAATATCTGCATAACCTCGGGATTGTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACGAAAATCTTCGTCCCCACCTTACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAAGGAGTTTCCCTTGAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGGAAGGAGCTACATACAGAAAAATCAGATGTGTACAGTTTTGGGGTATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGTCAGCCTATCTATCTCATGTGCTCACACAGTGCTTGAGATGAACTATACCGAGCAGCAACTAACAGCGGCTGTTGTTTCAGATGGATTACGACCAGTCCTTGCTACTGAGGAGTTGGGTATACCATCAAGATTATTGTCAATGATACAAAAGTGCTGGGATACAAATCCTAAAAGAAGACCTTCCTTTGATGATATTGTCAAGGAGCTTGATTTTATAATGGAGCACAGGACGACAAAGAAGGCAGAAGATATGCATATCAGACCTTGCAACTTGCATGTTGATCAACTTGTGGATGAGACCAGTTACCTTCCTGCTTGTCAAGAGAGTATTAACTGGTCCACTCAAGGTGAACTTTTTGCCAGGAGTTCCTCTAGTGCCACTGATTCTTGTTTGAGAACATGGCGTGAGTCTTATGACGACCCTTTAGTATACCATCCAACACTCTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGACACACATTTCGTTCTGCCCCATATTTGCAATGAAAATGATGTCTATGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCAGTTTTGCAAACTTTAGATTTTATCGGAAGCCCTGCTAATGCACTAGTGGAAGCATTCCTTAAGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCTTTCGTAAAACCAACAGATGTATGCAGAAGGATTGGCATCCTGGTTGTACTGCAATTGCTGCTCTTGTAGTCAGGAACAAGCTATTTGTTGCTAACATCGGTGATTGCAGGGCAATCTTATGTCGCGCTGGTAACTCCATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTGAAGAGAGAGAGCGCGTTATTCGTCATGGGGGCCACGTACATTGGCAAGTTGATACCTGGAGAGTCGGCCTTCCAGCGCTTCAGGTTACTCGTTCTATTGGTGATGATGATCTGAAGCCCGCTGTAACTGCAGAACCTGAGATTGCCGAGAGTACCTTATGTGCTGAGGATGAATTTCTGGTCATGGCTAGTGATGGTCTCTGGGATGTCATAAGCAGTATGGACGTTATAAATATAATAAAAAACACTGTTAAAGAGCCTGGAATGTGCTCTAAGAGGTTGGCTACAGAAGCAGTGGAACGTGGTAGCAAAGACAACATTACAGTTATTGTCGTTTTTTTACGCCCTGTATCCACAGCAGAGAGAATTTATTAG 1998 0.4314 MVIEIVEPNTCIRGCCTSSSIPLHLPPSSYTLLSPIARGAESVVYEGTLDGKKVAVKKPILSISEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESANLAQKLHVEEWIPTINHALMITMQLALALQYLHNLGIVHRDVKPANILLDENLRPHLTDFGLAEYKNDLKGVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVSINELLTGVVPYTDLRAEAQVSLSISCAHTVLEMNYTEQQLTAAVVSDGLRPVLATEELGIPSRLLSMIQKCWDTNPKRRPSFDDIVKELDFIMEHRTTKKAEDMHIRPCNLHVDQLVDETSYLPACQESINWSTQGELFARSSSSATDSCLRTWRESYDDPLVYHPTLSWGSYATCGRRETMEDTHFVLPHICNENDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTLDFIGSPANALVEAFLKTDAAFRKELDSFRKTNRCMQKDWHPGCTAIAALVVRNKLFVANIGDCRAILCRAGNSIALSKDHVASCLEERERVIRHGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEIAESTLCAEDEFLVMASDGLWDVISSMDVINIIKNTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4128g00001 665 Pfam Protein phosphatase 2C 403 648 IPR001932 -
Gabi4128g00001 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Gabi4128g00001 665 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 321 - -
Gabi4128g00001 665 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 390 659 - -
Gabi4128g00001 665 SUPERFAMILY PP2C-like 392 657 IPR036457 -
Gabi4128g00001 665 CDD PP2Cc 400 655 IPR001932 -
Gabi4128g00001 665 SUPERFAMILY Protein kinase-like (PK-like) 22 342 IPR011009 -
Gabi4128g00001 665 Gene3D Transferase(Phosphotransferase) domain 1 21 344 - -
Gabi4128g00001 665 FunFam Protein kinase and PP2C-like domain-containing protein 20 351 - -
Gabi4128g00001 665 ProSiteProfiles PPM-type phosphatase domain profile. 398 655 IPR001932 -
Gabi4128g00001 665 SMART serkin_6 30 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4128g00001 665 Gene3D - 391 660 IPR036457 -
Gabi4128g00001 665 SMART PP2C_SIG_2 413 655 IPR001932 -
Gabi4128g00001 665 ProSiteProfiles Protein kinase domain profile. 30 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4128g00001 665 SMART PP2C_4 388 653 IPR001932 -
Gabi4128g00001 665 Pfam Protein kinase domain 30 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4128g00001 Gabi-Chr4128 16336 27757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4128g00001 99 665 PP2C-type Phosphatase Gene Family AT2G40860 63.908 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Gabi4128g00001 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4128g00001 - - gmx:100785390 1150.58