Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4127g00004 ATGGCTCCTCCATGGTTTCAAGAGCTCCATCTCCGCCACTTGAGCATTTCTGTGACCATTGATAAAACGTTTATGGTTACGCCATCAAGGCCTATTCCCGTTAAACCAGGTGACAGTTTGTATCTTTCCAACCTCGATGACATGATTGGAGCTCGTGTATTTACACCTACAGTGTACTTTTATCAATCAGACAACTTGAGTTCTTCCCAAAAACCTGTGACAAAAACACTTCGCAATGCTCTCGCTGATGTTTTAGTGCCATATTACCCTCTCTCGGGCAGGCTCAAAGAGACCAAGAATGGTAAGCTAGAAGTGTTTTTTGGACCAGAACAAGGAGCATTCATGGTTGAGGCAAGATCTGATATTGCCTTAGCTGAACTAGGAGACCTCACAGCTCCAAACCCAGCTTGGGAACCTTTGATCTTCAAGTTCCCCAATGAAGAACCATACAGAGTCCTTGAAATGCCACTGGTAATTGCTCAGGTTACCCTTTTCCGCTGTGGTGGTTTTAGCCTTGGTTTAAGGCTCTGCCATTGCATATGTGATGGCCTTGGAGCTATGCAGTTCCTAGGTACATGGGCTGCCACAGCAAAAACAGGGATGCTAGTTACAGACCCTGAGCCATGTTGGGAAAGGGAAATTTTCAAGCCTCGTGACCCACCTGTGGTAAAATTCCCACACATGGAGTTCATGAGAATTGATGAGGGCTCCAACCTCACAATGACACTATGGCAAACCAAGCCTGTTCAAAAGTGTTATCGGATCAAGCGTGAGTTTCAAAACTGCTTGAAAGCTCTTGCTCAACCATTTGATGCTGCAGGTTGCACCACTTTTGATGCTATGGCAGCTCATATTTGGAGATCATGGGTGAAAGCTCTTGATGTGAAACCACTTGATTACCAGCTTAGGTTAACATTCTCAGTTAATGCTCGCCAGAAACTTAGAAACCCACCACTGAGAGAAGGGTTTTACGGCAATGTGGTGTGTGTTGCATGCACAACAAGTACTGTGTCTGAGCTTGTGCATGGAAAGCTCCCAGAGACTACCCTTTTAGTTCGTGAAGCTAGACAAAGTGTCTCAGAGGAGTATTTGAGGTCCACAGTGGATTATGTTGATGTGGATAGGCCAAGGCAACTTGAGTTTGGGGGTAAACTAACAATAACTCAATGGACTAGGTTCTCAATATACAAGTGTGCAGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGATTTAACGCCCACTCCTCAAGTTTGTGTGTTTCTACCTGAAGGGGATGCTGATTCTAGTGGTTCTATGATAGTGTGCATATGCTTGCCTGAGTCTGCTGCTCAGAAGTTTACACAAGCCTTGTTGCTCGATTCAGTGTTGACATAA 1383 0.4512 MAPPWFQELHLRHLSISVTIDKTFMVTPSRPIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQSDNLSSSQKPVTKTLRNALADVLVPYYPLSGRLKETKNGKLEVFFGPEQGAFMVEARSDIALAELGDLTAPNPAWEPLIFKFPNEEPYRVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGLGAMQFLGTWAATAKTGMLVTDPEPCWEREIFKPRDPPVVKFPHMEFMRIDEGSNLTMTLWQTKPVQKCYRIKREFQNCLKALAQPFDAAGCTTFDAMAAHIWRSWVKALDVKPLDYQLRLTFSVNARQKLRNPPLREGFYGNVVCVACTTSTVSELVHGKLPETTLLVREARQSVSEEYLRSTVDYVDVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGDADSSGSMIVCICLPESAAQKFTQALLLDSVLT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4127g00004 460 Gene3D - 238 453 IPR023213 -
Gabi4127g00004 460 Gene3D - 15 232 IPR023213 -
Gabi4127g00004 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 449 - -
Gabi4127g00004 460 Pfam Transferase family 17 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4127g00004 Gabi-Chr4127 66698 68080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4127g00004 16 454 Monolignol Biosynthesis Gene Families AT5G48930 30.000 5.59e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4127g00004 K15400 - gmx:100802814 845.114