Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4126g00002 ATGGCTGCCAATTTCTGGACATCATCTCACTACAAGCACCTTCTGGATCAAGAAGATGTGGATATGGTGAATCCACTTGACAAAGAAAAGGGTGTCACACTTGAGGATTTTAAGCTCATTAAGATGCACATGGCTAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCCACTGCAGTTACATACATGAGGCGTGTTTACACCAGGAAGAGTATGACAGAATATGATCCACGCCTGGTAGCTCCAACCTGTTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTCGGCTGCTTGTATTTTACATTAAAAAATTATATTCTGATGATAAGTATAGGTATGAAATCAAGGACATACTTGAAATGGAAATGAAGGTTTTAGAAGCACTTAACTATTACCTTGTTGTATTTCACCCCTACCGTTCACTATCGCAGTTGCTTCAAGATGCAGGTCTGAATGATCTAAGCATGACTCAACTAACTTGGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTGCATCCTCCACATCTGATTGCTTTAGCTTGCATATACATTGCTAGTGTGCTCAGAGATAAAGACACCACTGTCTGGTTCGAAGAACTTCGTGTTGATATGAACGTGGGGTCAGGAGTTGTTGAGGGTAGTTTGGTCAACAATGTGCAGGGCAATTTCTGTTGCTTAGGATCATATAATAATAGAATGCGTTGGACTATTAGTTGA 756 0.4061 MAANFWTSSHYKHLLDQEDVDMVNPLDKEKGVTLEDFKLIKMHMANYILKLAQQVKVRQRVVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYSDDKYRYEIKDILEMEMKVLEALNYYLVVFHPYRSLSQLLQDAGLNDLSMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLRDKDTTVWFEELRVDMNVGSGVVEGSLVNNVQGNFCCLGSYNNRMRWTIS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4126g00002 251 PANTHER CYCLIN 29 217 IPR043198 GO:0006357|GO:0016538
Gabi4126g00002 251 SUPERFAMILY Cyclin-like 146 218 IPR036915 -
Gabi4126g00002 251 Gene3D - 19 143 - -
Gabi4126g00002 251 CDD CYCLIN_AtCycC_rpt1 35 141 - -
Gabi4126g00002 251 Gene3D - 7 218 - -
Gabi4126g00002 251 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Gabi4126g00002 251 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Gabi4126g00002 251 SMART cyclin_7 46 136 IPR013763 -
Gabi4126g00002 251 SMART cyclin_7 149 234 IPR013763 -
Gabi4126g00002 251 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Gabi4126g00002 251 PIRSF Cyclin_C_H_G 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4126g00002 Gabi-Chr4126 19534 30897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4126g00002 60 199 Core Cell Cycle Gene Families AT5G27620 30.667 2.71e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4126g00002 K15161 - gmx:100784345 410.609