Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4124g00053 | ATGGTCAAGATAGAGAACAAGATCCACACAGATCCATCAAAGCCAATGCCATCTTTATCTTCATCATCAGCATCAAATGATCACAAAAAGAAGTATAAGGGAGTCAGAATGAGGAGCTGGGGCTCATGGGTATCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTGGGATCTTATTCAACAGCAGAAGCAGCAGCAAGAGCCTATGATGCTGCACTTCTATGCCTTAAAGGCTCCTCTGCCAATCTCAACTTCCCTCTGAGTTCTTCACATTACATTCCTCAAGACACTGTCATGTCCCCCAAATCAATCCAAAGAGTAGCTGCTGCTGCTGCTGCTAAGAGTTTTGTGGACAATGCTAACACCCTACCTTCCCCTCCTCCTGCTTCCACCTCATCATCATTGGTCTCATCCCCATCAATGTTATCCTCTCCTCCTGATCAAATAGATGATGATGTTTCACTACTGTCATCCTTTGGGGCCTACCCTAGCTATGATCAAGCAAATGAATCAATGGATATGATGGAATCTTGGTATGGCTTTGATGACCTACAATCCCCAAAATATGTTGATCATATGCTAAATGGGGCATTGTTTGATATTGATTCAACACAGCTACTTGATGATCTGTATGAAGAAAGTGACATTCGCTTGTGGAGTTTCTGCTGA | 675 | 0.4281 | MVKIENKIHTDPSKPMPSLSSSSASNDHKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPLSSSHYIPQDTVMSPKSIQRVAAAAAAKSFVDNANTLPSPPPASTSSSLVSSPSMLSSPPDQIDDDVSLLSSFGAYPSYDQANESMDMMESWYGFDDLQSPKYVDHMLNGALFDIDSTQLLDDLYEESDIRLWSFC | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4124g00053 | 224 | Gene3D | AP2/ERF domain | 30 | 90 | IPR036955 | GO:0003700|GO:0006355 | |
Gabi4124g00053 | 224 | SUPERFAMILY | DNA-binding domain | 31 | 90 | IPR016177 | GO:0003677 | |
Gabi4124g00053 | 224 | ProSiteProfiles | AP2/ERF domain profile. | 31 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi4124g00053 | 224 | Pfam | AP2 domain | 31 | 80 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi4124g00053 | 224 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Gabi4124g00053 | 224 | MobiDBLite | consensus disorder prediction | 122 | 149 | - | - | |
Gabi4124g00053 | 224 | CDD | AP2 | 30 | 90 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi4124g00053 | 224 | SMART | rav1_2 | 31 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi4124g00053 | 224 | FunFam | ethylene-responsive transcription factor ERF014-like | 30 | 90 | - | - | |
Gabi4124g00053 | 224 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 19 | 171 | - | - | |
Gabi4124g00053 | 224 | PRINTS | Ethylene responsive element binding protein signature | 54 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi4124g00053 | 224 | PRINTS | Ethylene responsive element binding protein signature | 32 | 43 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4124g00053 | Gabi-Chr4124 | 574864 | 575538 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4124g00053 | 32 | 223 | AP2-EREBP Transcription Factor Family | AT1G21910 | 54.680 | 5.07e-50 | 161 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Gabi4124g00053 | AP2 | 4.5e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4124g00053 | - | - | pvu:PHAVU_009G123300g | 280.796 |