Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00050 ATGGAAAAAATATGTGGTGCCAGTTTTGGCAAAATGTGCAACCAGGCAAAGCCTTATTTGTTAACTGTGGGGTTGCAATTTGGGATGGCTGGAACATACATATTCACCAAGGCAAGTCTGAATCATGGAATGAGTCGTTTGGTGTTCATTGTCTATCGCAATGCCATTGCTGCATTTGCCCTCGCTCCTTTTGCATTGATATTTGAAAGGAAAACTAGGCCAAAGATGACAATCTCTGTCTTCATACAGATACTAGCTCTTGGATTTCTGGAGCCAGTGATTGACCAAGGCTTCACTTTCTTGGGGATGCAATACACTTCGGCTTCATTTGCCTCTGCTGTTATGAATGCCGTACCCTCTGTAACCTTTGTGCTCGCAGTAATCCTCAGGTTAGAGCGTGTAAAAATCAAAGAGTTACGCAGTCAAGCGAAGGTGATTGGAACATTGGTAAGCTTTGGTGGGGCTTTGTTAATGACCCTTTACAAAGGCCCTCAAATGCACCTATTTCATCATTCAAACACAACACACCAGCAAGATGGAAGTCTCTCTCCTCAGAGTCACACAAACTGGGTCAAAGGAACTCTCTTTATATGCCTTGGTTGTGTGGCTTGGTCTTCTTTCTACATTTTGCAGTCCATAACGGTGAGAAAGTACCCTGCGGAACTATCATTATCATCCTTGATATGTTTGATGGGTGCATTGCAAAGTGCCGTGGTTGCGCTTGTAGCAGATCATAACTCTCGGGCATGGGCTATCGGTTTGGACTATAGACTCTATGGTCCTCTCTACACTGGAATAATGAGTTCAGGAATAGCATATTATATACAAGGGTTGGTAATGCAAAGCAGAGGACCAGTGTTCGTAACATCCTTTAATCCTCTTTGCATGATCATCGTTGCTGCTTTGAGTTCCTTCCTTCTAGGAGAACACATTTATCTGGGAAGTATCGTTGGAGGCATCATTATCGCAGTGGGTCTTTACTCTGTTGTGTGGGGTAAAGGAAAAGATGATGCAGAGCTCACACCACCATTAGCAACGACAAATAAAACAGAAACACAACAGCTGCCAATTACTTCAGCAACTAATAAATAA 1092 0.4304 MEKICGASFGKMCNQAKPYLLTVGLQFGMAGTYIFTKASLNHGMSRLVFIVYRNAIAAFALAPFALIFERKTRPKMTISVFIQILALGFLEPVIDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVILRLERVKIKELRSQAKVIGTLVSFGGALLMTLYKGPQMHLFHHSNTTHQQDGSLSPQSHTNWVKGTLFICLGCVAWSSFYILQSITVRKYPAELSLSSLICLMGALQSAVVALVADHNSRAWAIGLDYRLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVAALSSFLLGEHIYLGSIVGGIIIAVGLYSVVWGKGKDDAELTPPLATTNKTETQQLPITSATNK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00050 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
Gabi4124g00050 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Gabi4124g00050 363 PANTHER WAT1-RELATED PROTEIN 17 343 IPR030184 GO:0016020|GO:0022857
Gabi4124g00050 363 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Gabi4124g00050 363 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00050 Gabi-Chr4124 541396 544481 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00050 10 363 Nodulin-like Gene Family AT4G08300 48.596 8.55e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00050 - - gmx:100777641 593.193