Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00048 ATGGGTGAATTGACATATAGTGAGAAGGTACGCGCGTGGTTCCGCAATTCAAAGTCATATCTGCTAATAATAAGCTTGCAGTTTGGCTCGGCTGGCATGTACCTTATCACCATGGATGCCCTCAATAAGGGCATGAGTCATTATGTGTTTGTTGTTTACCGTAATGTCATCGCCACCGTAACTCTTGCTCCCTTTGCATTTTTTCTTGAAAGGAAAGTTAGGCCCAGGATGACAGCTCGGATATTTTCAGAGATTATGGCAGTGGCTTTTGTCGAGATAATACTTGATCAATGCTTCACCTTTTTGGGGATGAAGTTAACGTCAGCATCTTTTGCATCTGCCGTGATGAACTCCGTACCCTCCATTACCTTTGTACTGGCAATCATTTTTCGATTGGAGCGCATAAACATGAAGGAGCTAGGATGTCAAGCCAAAGTGATTGGCACTGTGGTAACTCTTGGAGGCGCTTTTCTAATGGCACTTTACAAAGGTCCCGTAGTTAACGTTGCAGGGTCATCATCAGCCAGTAATGTTGGCCAGCCTGAGAATGTGAACGACCCTAGTGGGGATCACTGGATCATTGGTGCATGTTTCCTCCTAATAGGCTGTGCAGGCTTCTCTGCTTTCTACATATTGCAAGCCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTAGCCACCTGGATTTGCTTTGTAGGTGCCCTCCAAAGCACTGCAGTAACTATTTTCATGGAGCGCAATAACCCTCATGCCTGGTCTCTAGGCTTGGATTCTAGGCTTTTTGCTTCTGCATACTCGGGAATAGTAACATCAGCAATCCAATTTTACGTGCAAGGCACGGTTATAAAAACTACGGGCCCAGTGTTTGTGACTGCTTTTAATCCCCTGCGTATGATCATAGTCACAGCCTTTGCTTGCTTCATCCTCTCAGAGAAACTCCACCTTGGAAGCATTATTGGAGGAGTAGTCGTGGTTATGGGACTATATCTAGTTGTGTGGGGCAAATCTAAAGAACACAAAAGTATGATGCCACCATCCCCTGAAAAGGAGATCACCCTGCAAGGCCAACAGCAGCTACCAGTTACTGTCCCCACAATTAATAACAACAATAATGAAGCTCAGTTAGTCATAATCGGAGATAAAATCAGCGATGTGGAAGCCACAAGATCGAGTACAGAGAAGCAATGA 1191 0.4484 MGELTYSEKVRAWFRNSKSYLLIISLQFGSAGMYLITMDALNKGMSHYVFVVYRNVIATVTLAPFAFFLERKVRPRMTARIFSEIMAVAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERINMKELGCQAKVIGTVVTLGGAFLMALYKGPVVNVAGSSSASNVGQPENVNDPSGDHWIIGACFLLIGCAGFSAFYILQAITLRKYPAEMSLATWICFVGALQSTAVTIFMERNNPHAWSLGLDSRLFASAYSGIVTSAIQFYVQGTVIKTTGPVFVTAFNPLRMIIVTAFACFILSEKLHLGSIIGGVVVVMGLYLVVWGKSKEHKSMMPPSPEKEITLQGQQQLPVTVPTINNNNNEAQLVIIGDKISDVEATRSSTEKQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00048 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 339 - -
Gabi4124g00048 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Gabi4124g00048 396 PANTHER WAT1-RELATED PROTEIN 21 346 IPR030184 GO:0016020|GO:0022857
Gabi4124g00048 396 Pfam EamA-like transporter family 20 159 IPR000620 GO:0016020
Gabi4124g00048 396 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00048 Gabi-Chr4124 507358 511546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00048 18 373 Nodulin-like Gene Family AT1G44800 45.506 1.85e-113 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00048 - - gmx:100813852 605.905