Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00047 ATGGAGGATCAAAATGCAGGTCATGGGTTGAGCAAGGTGCTCCGCAAGTTGAAGCCTTACCTTGCTATGGTGTCCCTTCAGTTTGGCTACGCCGGAATGTATATCATCACCATGGTTTCATTCAAACATGGCATGAGCCATTGGGTACTCTCCGTGTACCGTCATGTAGTTGCCACTCTTATCATGGCCCCTTTTGCATTTGTCCTCGAAAGAAAAGTACGGCCAAAGATGACTCTCCCCATCTTCCTGAGATTAGCGGCGCTCGGTTTCCTTGAGCCAGTGCTTGATCAAAACTTGTACAACATGGGGATGAAGATGACCTCAACAACGTTTGCATCGGCCACCGTTAATGTCCTCCCAGCCATTACTTTTATAATGGCACTCGCTTTCAGGTTAGAGACAGTAAACTTGAAAAAAATACACAGCATAGCCAAAGTAATTGGAACCGCGGTAACAGTGTCAGGAGCCATGGTTATGACTTTGTATAAAGGCCCTGCCCTTCAAATCATAAAGGGTCAAGCAGCAAATCATGGCAGTGCAAGCACCGAATCCTCTGACCAACACTGGGTTCTAGGCACATTGATGCTTATAGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTACCCAGCAGAGCTCTCGATGACATCTTGGATTTGCTTTTTGGGTATTTTTGAGGGTGCAATTGCATCACTTATATTTGAACGTGACATGAGTGTTTGGTCCATAGGCTGGGACTCAAGGCTTCTCGCTTGTGTTTATTCTGGGGTGGTGTGTTCTGGAATGGCATATTATATACAAGGAGTTGTGACAAGAGAACGTGGACCGGTGTTTGTGACTTCTTTCAGCCCTCTATGTATGATAATCACCGCTGCATTGGGTTCCATTATCTTGGCTGAGCAAGTTCGTCTGGGAAGTATAATTGGAGCTATTATCATTGTCTGTGGACTTTATACTGTGGTATGGGGAAAAAGCAAAGACAGTTTGAACACCACAGGTGGAGGGAAAAGTGAAGTCCAAGAATTGCCTATAAAGGATGGTACACGATCAGGATCAGACAATTTTGACAACATTGAGGTCAATGTTCCTGTTGAGATGAAGGGGGTAGGAAATAATGTCCTATCTTCAACAAGATCATAA 1164 0.445 MEDQNAGHGLSKVLRKLKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVVATLIMAPFAFVLERKVRPKMTLPIFLRLAALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALAFRLETVNLKKIHSIAKVIGTAVTVSGAMVMTLYKGPALQIIKGQAANHGSASTESSDQHWVLGTLMLIASCGGWASFFILQSFTLKMYPAELSMTSWICFLGIFEGAIASLIFERDMSVWSIGWDSRLLACVYSGVVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSIILAEQVRLGSIIGAIIIVCGLYTVVWGKSKDSLNTTGGGKSEVQELPIKDGTRSGSDNFDNIEVNVPVEMKGVGNNVLSSTRS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00047 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Gabi4124g00047 387 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Gabi4124g00047 387 Pfam EamA-like transporter family 31 151 IPR000620 GO:0016020
Gabi4124g00047 387 PANTHER WAT1-RELATED PROTEIN 19 336 IPR030184 GO:0016020|GO:0022857
Gabi4124g00047 387 MobiDBLite consensus disorder prediction 337 363 - -
Gabi4124g00047 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00047 Gabi-Chr4124 488927 492572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00047 14 380 Nodulin-like Gene Family AT4G08300 63.881 6.85e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00047 - - gmx:100814921 644.039