Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00041 ATGGAGGAGGATGCGTTAAAAATAGCTTCTTTACTCCAATCTTTTCAGGATCTCCATCAGAGGCTCGATTTGTCTTTTACCTCCAACTTTTCACTCACTATTAAGATAGATGAGCTTTTGGGGAAACAAGAGGAATTATGCAAATCGAAATCCGAGTTAGAAGTGAAGGTTGAGGATCTTTCTTCTGAATTGGCCGAGGTTAAGAAAGCTTTGGAGTTGGCCAATACTAAGGTGGATGGCTTGAGTGCTGAGATGGAAGCCTTCTTGAAGTCCATGGCTGAAAAGGACGTTCAGTTTCAGAAGTTCCAGGCCGACTTCGAGGAAGCTCGGACCGTCATTATAAACGCCGATGTTGAATCCTTTGCCAATGCCATTGCACAAGCTCGGGTCTTGAACCCCGGTCTTATTACGGAAGGGATGGACGTTTCCTATGGAGTGAAAGATGGATCAATCATTCCTGGAACTCTGGGTTCTGAATCTCCAGAGGAGGAGGAAACCGAGGCCGAGGGGTCTTCCCAAATTGCGGCGAGCTTGCCATCTTTGGCATTTTTGTTGCCGATGTCCGCTCTCCTTAACACCAAATCGCCGTTCTGGAACGACCGAGGATGGCTCTCTGATCTCTACTGGGGTCATAACCTCACATCCATATGTCAGCTTGAAGGGAGTTTCCTCTGTGGCGGGTTGGGCACTCGTTCTAAAGCAGATATTGAGACTTATTTGACTGACAAAGCTTCGTTGCGCAAACCACTAAAGGAGAAATCTAGAGAAAAGTCAGCAAAACATATAGAGAAGACTTATATTGTCTACATGGGTGATCATCCTAAGGACATGGACTCCACATCCTTACCTTTTCTTCATATGGACATGGCTCAAAAGATCCTTGGCAGTGATTTTGCACCAGAAGCTATACTTCACAGCTACAAGAGCTTTAATGGGTTCGTCATGAAATTAACAGAAGAGGAGGCGGAAAGAATGGCAGAAATGGACACTGTCGTCTCTGTTTTCCCAAACAAAAAGAACCGTCTTCACACAACAAGATCGTGGGACTTCCTAGGCTTTCCCCAGCAAGTCAAAAGAACAAGTATTGAGAGTGACATAATTGTTGGAGTATTAGACTATGGAATTTGGCCAGAGTCTGAGAGCTTCAGTGACAAAGGATTTGGTCCACCACCAAGCAAATGGAAGGGATCATGCCATAACTTTACCTGCAACAACAAAGTGATAGGTGCAAAATTCTTTAATATCGAAAGTTATTATACCAAAGAGGACATAAAATCTCCTAGGGATACAGAAGGGCACGGGTCACACTGTGCATCAACGATTGCTGGAAACTTGGTTAACCATGCAAGTCTACTAGGCTTTGCCAGCGGAACAGCCCGTGGAGGAGTTCCATCAGCACGAATTGCTGTGTACAAAATATGTTGGAAATCTGGTTGTTCAGAAGCTGACACACTTGCAGCATTTGATGAAGCAATTATTGATGGAGTTGACCTGATTTCTACATCAACGGGAGCAGATGTCATAGTATACCCTGAGTATTTTGAAGATGCAATTAATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTGAGGTCAAATTCTGCTAATAATTTGGGTCCGGAGCTTTACTCTATGACAAATTATCCCCCTTGGTTACTTTCTGTGGCTGCTACCACTATTAACAGAAAGTTCGTTACCAAGCTCCAATTGGGCAATGGCATGGTTTATGAGGGGGTTTCAATGAACACATTTGATCTCAAAAGCAAAATGTTTCCCCTGATTGTATCATCCGGGTTTTTGTCTGGTGCGGTTGGTGTTATTGTTGGAGCCACTGGTCAGAAAGACCGAACAACTGCATTTGCCCTGCCTGCCACTGTTCTCACAACTAACGACTTCAGACTCGTAAATTCTTACATTGATTTAGCGGGCAAAAACGCAACAGCCACCATATTCAGGAGTGATGAAGTCAATAATTCGTTAGCACCTTACGTAGCTTCGTTCTCATCAAGAGGTCCAAATCCAATTACTCCAAACATTCTTAAGCCTGATCTCGCTGCCCCCGGTGTTAATATTATAGCTGCATATTCTCCAATGTCCCCAATTTCACATGTCCAAGGTGACAAAAGACTAGTAAAATATAATGTAATTTCTGGCACTTCAATGGCTTGTCCTCATGCTGCTGGGGCAGCCGTATACGTCAAATCATTTCACCCCAATTGGTCTGCTGCTATGATCAAGTCTGCCTTGATGACCACAGCTACCCCAATGAGTGTTGCTCTTAATCCTGAAGCTGAATTTGCATATGGGGCGGGGCAAATTAATCCACTTAAGGCAGCAAATCCTGGTTTAGTATATGATATTAGCGAAGCAGATTATGTCAAGTTCTTATGCGGTGAGGGGTATACCAATGAAAAGCTCAGAGTACTCACTCAAGATCATGCTAAGTGCAGCAAAAAACCTAACAAGTTAGTTGTATACAACCTTAATCTCCCATCATTTGCTCTCAAAGTAAACGCCTCTTTCTATCGTGTTTTTCATCGAACAGTTACAAATGTGGGATCAGCAACATCTAGTTATAAAGCCCAATTGATGTTTCCATCATTCTTGGATATTCAAGTGAAACCAGATGTTCTGTCCTTCACATCTATTGGACAGAAAAAGTCATTCTCGGTCATAATTGTTGGGAAGATTAATGTGGAAACAACCTCTGCCTCTTTGGTTTGGGATGATGGGAATTATCAAGTTAGAAGTCCAGTTGTTATATATAGTGATCCTTGA 2781 0.429 MEEDALKIASLLQSFQDLHQRLDLSFTSNFSLTIKIDELLGKQEELCKSKSELEVKVEDLSSELAEVKKALELANTKVDGLSAEMEAFLKSMAEKDVQFQKFQADFEEARTVIINADVESFANAIAQARVLNPGLITEGMDVSYGVKDGSIIPGTLGSESPEEEETEAEGSSQIAASLPSLAFLLPMSALLNTKSPFWNDRGWLSDLYWGHNLTSICQLEGSFLCGGLGTRSKADIETYLTDKASLRKPLKEKSREKSAKHIEKTYIVYMGDHPKDMDSTSLPFLHMDMAQKILGSDFAPEAILHSYKSFNGFVMKLTEEEAERMAEMDTVVSVFPNKKNRLHTTRSWDFLGFPQQVKRTSIESDIIVGVLDYGIWPESESFSDKGFGPPPSKWKGSCHNFTCNNKVIGAKFFNIESYYTKEDIKSPRDTEGHGSHCASTIAGNLVNHASLLGFASGTARGGVPSARIAVYKICWKSGCSEADTLAAFDEAIIDGVDLISTSTGADVIVYPEYFEDAINIGSFHAMKRGILRSNSANNLGPELYSMTNYPPWLLSVAATTINRKFVTKLQLGNGMVYEGVSMNTFDLKSKMFPLIVSSGFLSGAVGVIVGATGQKDRTTAFALPATVLTTNDFRLVNSYIDLAGKNATATIFRSDEVNNSLAPYVASFSSRGPNPITPNILKPDLAAPGVNIIAAYSPMSPISHVQGDKRLVKYNVISGTSMACPHAAGAAVYVKSFHPNWSAAMIKSALMTTATPMSVALNPEAEFAYGAGQINPLKAANPGLVYDISEADYVKFLCGEGYTNEKLRVLTQDHAKCSKKPNKLVVYNLNLPSFALKVNASFYRVFHRTVTNVGSATSSYKAQLMFPSFLDIQVKPDVLSFTSIGQKKSFSVIIVGKINVETTSASLVWDDGNYQVRSPVVIYSDP 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00041 926 Coils Coil 43 84 - -
Gabi4124g00041 926 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 250 343 IPR037045 -
Gabi4124g00041 926 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 266 921 IPR045051 -
Gabi4124g00041 926 PRINTS Subtilisin serine protease family (S8) signature 429 442 IPR015500 -
Gabi4124g00041 926 PRINTS Subtilisin serine protease family (S8) signature 363 382 IPR015500 -
Gabi4124g00041 926 PRINTS Subtilisin serine protease family (S8) signature 718 734 IPR015500 -
Gabi4124g00041 926 ProSiteProfiles Serine proteases, subtilase domain profile. 347 780 - -
Gabi4124g00041 926 ProSitePatterns Serine proteases, subtilase family, serine active site. 719 729 IPR023828 -
Gabi4124g00041 926 ProSitePatterns Serine proteases, subtilase family, histidine active site. 433 443 IPR022398 -
Gabi4124g00041 926 FunFam Subtilisin-like protease SBT1.5 365 572 - -
Gabi4124g00041 926 Gene3D - 602 658 - -
Gabi4124g00041 926 Gene3D - 562 596 - -
Gabi4124g00041 926 Pfam Subtilase family 364 772 IPR000209 GO:0006508|GO:0008236
Gabi4124g00041 926 CDD Peptidases_S8_3 342 755 IPR034197 -
Gabi4124g00041 926 SUPERFAMILY Subtilisin-like 342 784 IPR036852 GO:0004252|GO:0006508
Gabi4124g00041 926 Pfam Fibronectin type-III domain 828 922 IPR041469 -
Gabi4124g00041 926 Gene3D - 797 925 - -
Gabi4124g00041 926 Pfam Peptidase inhibitor I9 265 343 IPR010259 -
Gabi4124g00041 926 Gene3D Peptidase S8/S53 domain 365 561 IPR036852 GO:0004252|GO:0006508
Gabi4124g00041 926 Gene3D Peptidase S8/S53 domain 659 793 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00041 Gabi-Chr4124 422296 445390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00041 263 925 Subtilisin-like Serine Gene Family AT5G58830 47.845 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00041 - - gmx:100815516 977.622