Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4124g00036 | ATGGCTAACAATCACGTCACCACTGATTCCCCTCTCTCTCGTCGCATAGTTCGTGCCTTCCTTCACTTCCTCAACTCTGTTGAACCTAGCCAAGGGATTGATGATGAAGGGATTGAGGTTGCTAGGGAGTGTTTGGCAGAGGCATTTAAGCTTAACTCATCTCCTGTGACCGGTGATCCTGAGAAATATGATTCATTGATTGACATGTTCAAGTCCCTTGAAGAAGCAAACAAGCAATGTGAAACTAGTAAGTCAGACGTTGGTCCTCAACCAGATTCTGTGGATGCTTCCAGTTCATTCTCTGCTCAGAATCCTGCTCATACTAAAAATAATCCCGAGGCATCGAAATCTACGGATGAAGGTTGGACACAGGATCCTCACATATTTGCAGCATCTAAAGATGAACTCTGTGGACAATTCTTTGCTGCTCTGGAGAAAAATCACTATTTTAGGACCAATGTTGATGGGAGTGATGACCCAGTGCAACTGGAGAAAGCATCTCATTTATTTGATAATGCTTTTATGGAGATGGAAAGATCTGGGTGTCGGGAGTTTAGTTTGAAGAATTTGGCTGAATCCCTAAAATCGCTAGGTAACAAGGCAGTGCAATCCAAGCAATTTCTTGATGCAATTGAGTTGTATAATTGTGCAATTGCGCTCTATGAAAAAAGTGCCGTTTTCTACTGCAACAGGGCAGCTGCTTACACTCAGATTAGCAAATATACAGAAGCAGTCCAAGATTGTCTTAGATCTATCGAGATTGATCCAAACTACAGCAAGGCATACAGTCGTCTGGGTTTAGCTTATTATGCACAAGGAAACTATAGAGATGCTATTGATAAAGGGTTTAAAAAAGCCTTGCAGTTGGATCCGAACAATGAGTCTGTTAAAGAAAATATACGGGTAGCTGAGCAAAAATTGATTGAAGAGCAACATCACGCAGATCATAATCAGAATTCAAGATCATCTCAAGAATCCCAAAACCAATCTGCAAGAGGATCAAGAAGCCATGCAATGCCGCCTCCATTTAACTCAATGCCATTTAATCCCAATGATATTGCAAGCATGTTTATGAACATGGCCGCAAATGCTACAAATGCACATCAGGGGTCGCATCCTCAGGAAAGGCAAGAAGATACCAATACTAGTGGAGCTAATGAACCAGAGATAAGAATGGGGCGCAATGTTAGTGTAAATTTTGACCAAATGCCTGAGCATCTAACAGGGGCCTTTCAATCTGTGATGGAAATGTTATCTAGGACTGTACCTCCTGACCAACCACAAGATCAAACCAATGGAAGAACAGCCGCAAATGCTACAAATGCACATCAGGGGTCGCATCCTCAGGAAAGGCAAGAAGATACCAATACTAGTGGAGCTAATGAACCAGAGATAAGAATGGGGCGCAATGTTAGTGTAAACTTTGACCAAATGCCTGAGCATCTAACAGGGGCCTTTCAATCTGTGATGGAAATGTTTTCTAGGACTGTACCCCCTGACCAACCACAAGATCAAACCAATGGAAGAACAGCACCAAACTAA | 1542 | 0.4235 | MANNHVTTDSPLSRRIVRAFLHFLNSVEPSQGIDDEGIEVARECLAEAFKLNSSPVTGDPEKYDSLIDMFKSLEEANKQCETSKSDVGPQPDSVDASSSFSAQNPAHTKNNPEASKSTDEGWTQDPHIFAASKDELCGQFFAALEKNHYFRTNVDGSDDPVQLEKASHLFDNAFMEMERSGCREFSLKNLAESLKSLGNKAVQSKQFLDAIELYNCAIALYEKSAVFYCNRAAAYTQISKYTEAVQDCLRSIEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFKKALQLDPNNESVKENIRVAEQKLIEEQHHADHNQNSRSSQESQNQSARGSRSHAMPPPFNSMPFNPNDIASMFMNMAANATNAHQGSHPQERQEDTNTSGANEPEIRMGRNVSVNFDQMPEHLTGAFQSVMEMLSRTVPPDQPQDQTNGRTAANATNAHQGSHPQERQEDTNTSGANEPEIRMGRNVSVNFDQMPEHLTGAFQSVMEMFSRTVPPDQPQDQTNGRTAPN | 513 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 365 | 390 | - | - | |
Gabi4124g00036 | 513 | Gene3D | Immunoglobulin FC, subunit C | 3 | 76 | - | - | |
Gabi4124g00036 | 513 | Gene3D | Tetratricopeptide repeat domain | 186 | 340 | IPR011990 | GO:0005515 | |
Gabi4124g00036 | 513 | SMART | tpr_5 | 191 | 224 | IPR019734 | GO:0005515 | |
Gabi4124g00036 | 513 | SMART | tpr_5 | 225 | 258 | IPR019734 | GO:0005515 | |
Gabi4124g00036 | 513 | SMART | tpr_5 | 259 | 293 | IPR019734 | GO:0005515 | |
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 423 | 463 | - | - | |
Gabi4124g00036 | 513 | SUPERFAMILY | TPR-like | 190 | 304 | IPR011990 | GO:0005515 | |
Gabi4124g00036 | 513 | ProSiteProfiles | TPR repeat profile. | 225 | 258 | IPR019734 | GO:0005515 | |
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 421 | 465 | - | - | |
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 78 | 123 | - | - | |
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 82 | 122 | - | - | |
Gabi4124g00036 | 513 | PANTHER | LD24721P | 1 | 440 | IPR047150 | - | |
Gabi4124g00036 | 513 | ProSiteProfiles | TPR repeat profile. | 259 | 293 | IPR019734 | GO:0005515 | |
Gabi4124g00036 | 513 | Pfam | TPR repeat | 234 | 273 | - | - | |
Gabi4124g00036 | 513 | FunFam | Tetratricopeptide repeat (TPR)-like superfamily protein | 186 | 338 | - | - | |
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 313 | 351 | - | - | |
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 320 | 335 | - | - | |
Gabi4124g00036 | 513 | MobiDBLite | consensus disorder prediction | 365 | 388 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4124g00036 | Gabi-Chr4124 | 301087 | 311248 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4124g00036 | 190 | 329 | U-box Gene Family | AT3G07370 | 26.667 | 3.20e-08 | 53.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4124g00036 | K16365 | - | gmx:100799770 | 642.499 |