Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00019 ATGGCGGATTCAAAGGTAGAGACGATTGCCAGATTAGCCCAATGGAAAATCGACAACTTCGGACCCTGTTCCTACAAAAAATCCGAACCTTTCAGGCTTGGAATCTGGAACTGGTATTTGTCCATAGAGAGAAACAGGTACCTCTACATACACCTTTTTCCAGAACCGTCGCGGGTTTCTAAGGAACAGCCACCTGTTGCTCGCTTCATTCTCCGAGTGTCTAGTGCTGGCTCTCCTCGCAAATTTTACATTTCTCCTGTTTATGAAAAGGTGCTTAGGACATGCGATGACTTTGTCTGGCCTGTGGATACTGCATTCCTTGGACGCTTCATTATTGATGTCGAATTTCTTGACCTGAAAACATGCCCTCTGAATGGTAGAGAAGCCTGTTCTATATGGCCATCTGATGGAAAACTGCAATCAGTGGCAGCTCAAAGCACTCTTCGATGCCTCTCTCGCATGCTTGATGATGCTATACATGCTGATCTCACCATTATCACTGCACATGACACACTGAGAGCACATAAGGCAGTTTTGTCTGCAAGTTCTCCTATCTTCCAGGGCTTGTTTCATCTCAACGGGGAGGCAAAAGAGTCATCGACAATCCACATAGAAGACATGTCACAAGAATCCTGCATGGCCTTCCTGAGTTACTTGTACGGCACAATAAAACAAGAAGATTTCTGGAAGCACAGGCTTGCATTGCTTAGAGCAGCCAATAAATATGAAATTGGTGATCTCAAAGAAGCCTGTGAGGATAGCCTACTGGAAGATCTTAATTCAGGGAATGTTCTGGAGAGGCTTAATGAGGCTTGGCTTTACCAGTTGAACAAGTTAAAAAAAGGATGCTTCACGTTCTTATTTGATTTTGGTAAGATATATGATGTTAGAGATGAGATAAATACGTTTTTCCGTCATGCAGATAGGGAGCTAATGCTGGAGATGTTTCAGGAGGTGCTTACAATTTGGAAATAG 975 0.4349 MADSKVETIARLAQWKIDNFGPCSYKKSEPFRLGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPVARFILRVSSAGSPRKFYISPVYEKVLRTCDDFVWPVDTAFLGRFIIDVEFLDLKTCPLNGREACSIWPSDGKLQSVAAQSTLRCLSRMLDDAIHADLTIITAHDTLRAHKAVLSASSPIFQGLFHLNGEAKESSTIHIEDMSQESCMAFLSYLYGTIKQEDFWKHRLALLRAANKYEIGDLKEACEDSLLEDLNSGNVLERLNEAWLYQLNKLKKGCFTFLFDFGKIYDVRDEINTFFRHADRELMLEMFQEVLTIWK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00019 324 Pfam BTB/POZ domain 155 257 IPR000210 GO:0005515
Gabi4124g00019 324 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Gabi4124g00019 324 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Gabi4124g00019 324 PANTHER OS08G0495500 PROTEIN-RELATED 1 324 IPR044714 -
Gabi4124g00019 324 SMART BTB_4 161 259 IPR000210 GO:0005515
Gabi4124g00019 324 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Gabi4124g00019 324 SUPERFAMILY POZ domain 143 257 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00019 Gabi-Chr4124 187748 191834 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gabi4124g00019 BTB 8.5e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00019 K10523 - gmx:100775687 561.992