Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00015 ATGGAGCATGTGGATACCAGAGAGCTACAACAACAGAAGCAACAGCATTTTCATGTGTTGGTGGTTGATGATAGTGTCATCGACAGGAAGCTTCTGGAGAGGCTTCTGAGAGATTCTTCATGCAAAGCTACATTCGTTGACTCTGGAGACAAGGCTCTGAAATATCTTGGCCTGCTTGATAATGCTTCCTCAACTTCTTCAGAATCCTTGCAACAAGACGGAATAAAAGTGAATTTGATCATGACAGACTACTGCATGCCAGAGATGAGTGGCTACGATTTACTCAGACGAATCAAGGGATCTTGTTGGAAAGATGTACCAGTCGTTATTATGTCATCAGAAAATGTCCCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCACAGGAATTTCTATTGAAGCCTCTTCAGTTATCAGATTTGAAGAAGCTTCAGCCGTACTTTAAGAAATTCTTTGATAATTCTAGTAAACAAGAATCTGCTAACAGTTCCGTAGCTTCTCACAACGATGATAATAACAAGAATCTGGAGCATAGTTTTAAATCATCTGCTATTGTATCAACAATATTGCAGTTTTGGAAGTCTCTGTAA 591 0.4027 MEHVDTRELQQQKQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKYLGLLDNASSTSSESLQQDGIKVNLIMTDYCMPEMSGYDLLRRIKGSCWKDVPVVIMSSENVPSRISMCLEGGAQEFLLKPLQLSDLKKLQPYFKKFFDNSSKQESANSSVASHNDDNNKNLEHSFKSSAIVSTILQFWKSL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00015 196 Pfam Response regulator receiver domain 19 143 IPR001789 GO:0000160
Gabi4124g00015 196 CDD REC_typeA_ARR 19 144 - -
Gabi4124g00015 196 ProSiteProfiles Response regulatory domain profile. 18 149 IPR001789 GO:0000160
Gabi4124g00015 196 SUPERFAMILY CheY-like 17 143 IPR011006 -
Gabi4124g00015 196 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 167 IPR045279 GO:0009736
Gabi4124g00015 196 SMART REC_2 17 145 IPR001789 GO:0000160
Gabi4124g00015 196 Gene3D - 18 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00015 Gabi-Chr4124 145005 148296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00015 14 150 Response Regulator Gene Family AT3G57040 57.343 6.63e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi4124g00015 Response_reg 3e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00015 K14492 - gmx:100790440 283.493