Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00011 ATGTCTACAGTGGAGTCAGAGAAGAAGAAGAAGAAGGAAGCGTTCGACGCAGAAGCGGGTTCGCTGCTGATGAAGGAGCTGAGGGGAACCTTCGCTTCTGGCAAAACGCGAAGTTACGAGTGGAGAGTTTCGCAGCTCAACGCACTCTCCAACCTCCTCGTCGATCACGAGCAACAGATCGTCGATGCTCTTCTCAACGACCTCGCCAAGCCGCCACTCGAAACCGTCGTTTACGAGATTGCTATGTTGAAAAACTCATGTAAAGTTGCACTCAAGGAATTGAAACATTGGATGGCTTCGGAAAAGGTCAAAACTTCACTCACAACTTTTCCTTCTTCGGCTGAAATAGTATCTGAACCACTGGGAGTTGTGTTAATCATCTCTGCATGGAACTATCCATTATTGTTATCACTTGATCCAGTCGTTGGAGCTATCGCTGCTGGTAACGCTGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCATGTCATCACTGCTAGCAAAACTGTTAGGGGAGCACATGGATAACTCATCTATAAGAGTTGTTGAGGGGGCAGTAGATGAAACATCCGCATTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATTGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTGTTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCAATTTGAAGGTAGCAACTAGACGTATAATTGCAGGAAAGTGGGGTTGTAACAATGGACAAGCCTGCATTTCTCCAGATTATGTTATAACAACAAAAGACTATGCTCCCAAGTTGGTGGATGCCCTAAAGACTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCCCGTATTGTGAACTCCAACCACTTTGCTCGCTTGGCAAAGCTCTTGGACGATGATAAGGTTTCTGGTAAGATTGTTTATGGGGGTGAAAAGGATGAAGGCAAATTGAGGATTAGCCCCACTGTTCTATTGGATGTCCCGCGAGATTCTCTGATAATGAGTGAGGAGATATTTGGTCCTTTACTTCCTATCCTCACGGTCGATAAACTGGAAGAAAGCTTTGATGTGATCAATTCAGGATCAAAGCCTCTTGCTGCATATATATTTACAACCGACAAGAAGCTCAAGGAGCAGTTTGTTATGACTGTTTCTGCTGGGGGTTTGGTTGTCAATGACACTACTTTACATCTTGCAGTTCATACTTTGCCATTTGGGGGAGTTGGTGAGAGTGGAGTGGGTGCATATCATGGGAAATTCTCATTTGATGCTTTTAGCCACAAAAAAGCAGTTCTATATCGCAGTTTTATGGGTGATGCATCAGTAAGGTACCCACCGTACACGAATACAAAGCTGAGATTGCTGAAGGCTCTCATTGGTGGTGGCATACTTGGTATAATTCGTGCACTGTTTGGATTGTCCTAG 1479 0.4402 MSTVESEKKKKKEAFDAEAGSLLMKELRGTFASGKTRSYEWRVSQLNALSNLLVDHEQQIVDALLNDLAKPPLETVVYEIAMLKNSCKVALKELKHWMASEKVKTSLTTFPSSAEIVSEPLGVVLIISAWNYPLLLSLDPVVGAIAAGNAVVLKPSEIAPAMSSLLAKLLGEHMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYVITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFARLAKLLDDDKVSGKIVYGGEKDEGKLRISPTVLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFDVINSGSKPLAAYIFTTDKKLKEQFVMTVSAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFMGDASVRYPPYTNTKLRLLKALIGGGILGIIRALFGLS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00011 492 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 225 232 IPR029510 GO:0016491
Gabi4124g00011 492 SUPERFAMILY ALDH-like 26 465 IPR016161 GO:0016491
Gabi4124g00011 492 PANTHER ALDEHYDE DEHYDROGENASE 23 479 IPR012394 GO:0006081
Gabi4124g00011 492 Pfam Aldehyde dehydrogenase family 35 449 IPR015590 GO:0016491
Gabi4124g00011 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 447 IPR016162 GO:0016491
Gabi4124g00011 492 CDD ALDH_F3FHI 21 451 - -
Gabi4124g00011 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 229 429 IPR016163 GO:0016620
Gabi4124g00011 492 FunFam Aldehyde dehydrogenase 28 232 - -
Gabi4124g00011 492 FunFam Aldehyde dehydrogenase 229 429 - -
Gabi4124g00011 492 PIRSF ALDH 5 482 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00011 Gabi-Chr4124 107960 114364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00011 80 492 Aldehyde Dehydrogenase Gene Family AT1G44170 75.787 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00011 K00128 - gmx:100778722 829.32