Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00009 ATGGCGTCTACCATAAGCAAGAAAGTGTTTGATTCAGAAGAAGCTTCAGCAATGGTTAAGGATCTGAGAGTAACGTTTGATTCTGGTAAGACTCGAAGCTATGAGTGGAGAGCATCCCAGTTGAAGGGCCTTATGAAGTTAACTGAACAGCACGAGCAAGAGATCGTTCGAGCTCTTCACTCCGACCTATCCAAGTCTGAAACTGAATCCTTCATCCAAGAGATTGCTATGTTGAAAAACTCATGTAAAGTTGCACTCAAGGAATTGAAACATTGGATGGCTTCGGAAAAGGTCAAAACTTCACTCACAACTTTTCCTTCTTCGGCTGAAATAGTATCTGAACCACTGGGAGTTGTGTTAATCATCTCTGCATGGAACTATCCATTATTGTTATCACTTGATCCAGTCGTTGGAGCTATCGCTGCTGGTAACGCTGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCATGTCATCACTGCTAGCAAAACTGTTAGGGGAGCACATGGATAACTCATCTATAAGAGTTGTTGAGGGGGCAGTAGATGAAACATCCGCATTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATTGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTGTTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCAATTTGAAGGTAGCAACTAGACGTATAATTGCAGGAAAGTGGGGTTGTAACAATGGACAAGCCTGCATTTCTCCAGATTATGTTATAACAACAAAAGACTATGCTCCCAAGTTGGTGGATGCCCTAAAGACTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCCCGTATTGTGAACTCCAACCACTTTGCTCGCTTGGCAAAGCTCTTGGACGATGATAAGGTTTCTGGTAAGATTGTTTATGGGGGTGAAAAGGATGAAGGCAAATTGAGGATTAGCCCCACTGTTCTATTGGATGTCCCGCGAGATTCTCTGATAATGAGTGAGGAGATATTTGGTCCTTTACTTCCTATCCTCACGGTCGATAAACTGGAAGAAAGCTTTGATGTGATCAATTCAGGATCAAAGCCTCTTGCTGCATATATATTTACAACCGACAAGAAGCTCAAGGAGCAGTTTGTTATGACTGTTTCTGCTGGGGGTTTGGTTGTCAATGACACTACTTTACATCTTGCAGTTCATACTTTGCCATTTGGGGGAGTTGGTGAGAGTGGAGTGGGTGCATATCATGGGAAATTCTCATTTGATGCTTTTAGCCACAAAAAAGCAGTTCTATATCGCAGTTTTATGGGTGATGCATCAGTAAGGTACCCACCGTACACGAATACAAAGCTGAGATTGCTGAAGGCTCTCATTGGTGGTGGCATACTTGGTATAATTCGTGCACTGTTTGGATTGTCCTAG 1464 0.4242 MASTISKKVFDSEEASAMVKDLRVTFDSGKTRSYEWRASQLKGLMKLTEQHEQEIVRALHSDLSKSETESFIQEIAMLKNSCKVALKELKHWMASEKVKTSLTTFPSSAEIVSEPLGVVLIISAWNYPLLLSLDPVVGAIAAGNAVVLKPSEIAPAMSSLLAKLLGEHMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYVITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFARLAKLLDDDKVSGKIVYGGEKDEGKLRISPTVLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFDVINSGSKPLAAYIFTTDKKLKEQFVMTVSAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFMGDASVRYPPYTNTKLRLLKALIGGGILGIIRALFGLS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00009 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Gabi4124g00009 487 Pfam Aldehyde dehydrogenase family 11 444 IPR015590 GO:0016491
Gabi4124g00009 487 FunFam Aldehyde dehydrogenase 224 424 - -
Gabi4124g00009 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Gabi4124g00009 487 CDD ALDH_F3FHI 15 446 - -
Gabi4124g00009 487 PANTHER ALDEHYDE DEHYDROGENASE 13 474 IPR012394 GO:0006081
Gabi4124g00009 487 FunFam Aldehyde dehydrogenase 23 227 - -
Gabi4124g00009 487 SUPERFAMILY ALDH-like 14 460 IPR016161 GO:0016491
Gabi4124g00009 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Gabi4124g00009 487 PIRSF ALDH 3 477 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00009 Gabi-Chr4124 107960 120060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00009 71 487 Aldehyde Dehydrogenase Gene Family AT1G44170 75.000 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00009 K00128 - gmx:100778722 791.956