Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4124g00003 ATGGCAACCGAGCTTCAATTGCCACCTGGATTCAGATTCCACCCAACTGACGAGGAGCTCGTGATGCATTACCTCTGCCGGAAATGCGCGTCGCAGCAAATCGCCGTTCCGATCATCGCCGAAGTTGACCTTTACAAGTACGATCCATGGGACCTTCCAGGAATGGCCTTGTATGGAGAGAAGGAGTGGTACTTCTTTTCACCGCGGGACCGGAAATACCCGAACGGTTCGAGGCCGAACCGGGCGGCTGGAACCGGTTACTGGAAGGCAACCGGAGCGGATAAACCGATTGGTCATCCTAAACCGGTTGGAATCAAGAAAGCTTTAGTGTTCTACGCAGGGAAAGCGCCCAAAGGAGTGAAAACAAACTGGATCATGCACGAGTATCGTCTGGCCGACGTGGATCGCTCCGTTCGTAAAAAGAACAGTTTAAGGCTGGATGATTGGGTGCTTTGTCGCATTTACAACAAGAAAGGCACCGTTGAGAAACAACCGAGTAGTATCTGCAAAACCGAATCCTCAGGAATGGAGGATAAGAAGCCGGAGATTCTAACGAGTGGCGGAGCTCTTTTACCGCCGCCGCCTCCTGCGGCGGCGGTGACGGATTACATATACTTCGACGCCTCCGACTCGATTCCGAAGCTGCACACGGCGGATTCAAGCTGCTCGGAACACGTGGTTTCGCCGGAGTTCGCGAGTGAGGTGCAGAGCGAGCCAAAGTGGAACGAGTGGGACCAGAAGAAGAACCTCGAGTTTCCCTATAATTACGTGGATGCCACTCTAAACTGTGGGAGCTTCGGGTCCCAATTCCAGAGCGGTAATCAGATGTCGCCGCTGCAGGATATCTTCATGAAGTGGCTGGCTTGGCCCATAAGAATGTCTTCTCCTCAACAGTCAACACCATGCATATCCCATGTCAACTTGGGACAGAGATTGGAGGCCCATGAATGTACCAATGCAGACGAATGA 969 0.5263 MATELQLPPGFRFHPTDEELVMHYLCRKCASQQIAVPIIAEVDLYKYDPWDLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGVKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTVEKQPSSICKTESSGMEDKKPEILTSGGALLPPPPPAAAVTDYIYFDASDSIPKLHTADSSCSEHVVSPEFASEVQSEPKWNEWDQKKNLEFPYNYVDATLNCGSFGSQFQSGNQMSPLQDIFMKWLAWPIRMSSPQQSTPCISHVNLGQRLEAHECTNADE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4124g00003 322 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Gabi4124g00003 322 FunFam NAC transcription factor 16 161 - -
Gabi4124g00003 322 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Gabi4124g00003 322 PANTHER NAC TRANSCRIPTION FACTOR 56 7 216 - -
Gabi4124g00003 322 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Gabi4124g00003 322 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4124g00003 Gabi-Chr4124 28482 31605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4124g00003 1 284 NAC Transcription Factor Family AT1G01720 71.724 1.59e-149 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4124g00003 NAM 4.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4124g00003 - - gmx:100805768 481.87