Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4120g00010 ATGGGGTGGCCCTTGTTTGGAGAGACTCCTGGCTTTCTCAAGCCCCATAGATCAAACTCATTGGGAAGCTTCTTACAAGAACATTGTTCTAGGTATGGCAAAGTTTTCAAGTCTCATTTGTTTGGTGCTCCCACCATAGTTTCATGCGACTTTGAGCTCAACATGTTTATTCTTCAGAATGAAGGGAAACTATTCCCTGTTGATTACCCCAAGGTAATGCATAACATCTTGGGGAAGTTCTCTGTGCTTCTTGTCACTGGCCATCTTCACAAGAAGCTAAGAAGCACCATTATAAGTTTTGTCAGTGCATCAAAGTCCGAATCCAACTTCCTTCACTGTGTAGAAATGCTTGCACTCTCAAGGATTAATTCATGGGATCTAAACTGTAAACAAGTTGTTTTCTATAAAGAAGCTAAAAGGTTTTCCATCAATGTTATGCTGAAGCACCTATTGAACATTAATCCTGATGAGCCACTAGCCTACAAGATTTTAGAAAACTTTGAGAACTACATCAAGGGTTTTGTTTCATTACCATTAAATATTCCAGGGACTGCATATTCCAATGCTGTGCAGGCTAGAATAAGACTCTCGTCTATTATCAAAGATATTATAATGGAGAGGCGTAAAGGTAATGTGGGGTTTGTGGAAGGAAGGGACCTATTGAATGTGATTTTGTCAAAGCAGAACCTATGTGATGAAGAGATGGTGAGCATTGTACTGGACCTCTTGTTTGGGGGTTATGAGACAACTGCAAAACTTTTGTCCCTAATTGTCTATTTCCTTGGGGGAGCCTCTAATGCTTTAGAAAGGTTAAAGGAAGAGCACCAAGTGATAAGGAAAAGCAAAATGGAGAGGGAACTACTGAACTTGGAAGATTATAAGCAAATGGAGTTTACTCAGGATGTGATAAATGAAGCTATGAGATGTGGGAATGTAGTCAAATTTCTGCACAGGAAAGCTTCTCAGGATGTCAAATTCAAAGAGTTTGTGATACCCGCAGGGTGGAAAGTTCTTCCTGTCTTATCTGCTGGACATTTGGATCACACTCTTTTTGAAAACCCTTTGGAGTTCAATCCCTTCCGGTGGAAAGACAATTCGACAAGCAAAAAAGTGGCACCGTTTGGTGGTGGTCCACGACTCTGTCCAGCGGCTGATCTAGCTAAAGTGGAGATAGCTTTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATCAAGGCAGATGATCACCCACTTGCTTTCCCTTACGTGGAGTTCACCGAAGGCCTGCTATTGGATCTTGAACCCACGGACACTACTTTTGGGTACCAGCACCCTTGA 1323 0.4157 MGWPLFGETPGFLKPHRSNSLGSFLQEHCSRYGKVFKSHLFGAPTIVSCDFELNMFILQNEGKLFPVDYPKVMHNILGKFSVLLVTGHLHKKLRSTIISFVSASKSESNFLHCVEMLALSRINSWDLNCKQVVFYKEAKRFSINVMLKHLLNINPDEPLAYKILENFENYIKGFVSLPLNIPGTAYSNAVQARIRLSSIIKDIIMERRKGNVGFVEGRDLLNVILSKQNLCDEEMVSIVLDLLFGGYETTAKLLSLIVYFLGGASNALERLKEEHQVIRKSKMERELLNLEDYKQMEFTQDVINEAMRCGNVVKFLHRKASQDVKFKEFVIPAGWKVLPVLSAGHLDHTLFENPLEFNPFRWKDNSTSKKVAPFGGGPRLCPAADLAKVEIAFFLHHLVLNYRWKIKADDHPLAFPYVEFTEGLLLDLEPTDTTFGYQHP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4120g00010 440 SUPERFAMILY Cytochrome P450 2 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 Pfam Cytochrome P450 3 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS P450 superfamily signature 372 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS P450 superfamily signature 245 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS E-class P450 group I signature 234 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS E-class P450 group I signature 371 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS E-class P450 group I signature 381 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 PRINTS E-class P450 group I signature 340 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4120g00010 440 CDD CYP90-like 28 430 - -
Gabi4120g00010 440 PANTHER CYTOCHROME P450 26 1 406 - -
Gabi4120g00010 440 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 374 383 IPR017972 GO:0005506|GO:0016705
Gabi4120g00010 440 FunFam Cytochrome P450 724B1 1 429 - -
Gabi4120g00010 440 Gene3D Cytochrome P450 1 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4120g00010 Gabi-Chr4120 154398 159089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4120g00010 1 326 Cytochrome P450 AT5G14400 55.319 1.54e-132 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4120g00010 K12639 - gmx:100791737 736.102