Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4119g00003 ATGGGTTACGACCCTCGTTTTTTCTGGTTTCACCTTCAATCCTTTTGGATTTCTTTGCTTATTATGATCATTTCTGTCTTTACCATTACCAAAGCCTTAAGATTTCCCTTAATTCAGAAGCCCAAGAAACCCAAGCTCCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTAGCAAACAAGCCTGCATTTCGGTGGATACACAAGTTGATGCAAGAAATGAACACTGAAATTGCATGTATTCGCTTAGGAAATGTCCATGTAATCACAATCACTAGCCCCACCATTGCATGTGAATTCTTGAGAAAACATGATGCAGATTTTGCATCAAGACCAATAAGCATGTCTACTCATATTGTCTCTAGTGGTTATGTGACTACAGCTCTTGTACCCTATGGGGAACAATGGAAGAAAATGAAGAAAATGGTTGCCAACCATTTGTTCTCCCCCATGAAGCATCAATGGCTTCAAGACAAAAGGACTGAAGAAGCAGATAACCTTATGTTCTACATCTACAACAAGTGCAAAAATGTGAATGATCGTGGCCTTGTGAATGTGAGGGATGTCGCACAACATTACTGTGGTAATGTGATCAGGAAAATGATTTTTAATGCAAGGTACTTCGGAAAGGGTAGGAAGAATGGAGGACCTGGTTTTGAGGAAGCAGAACATGTAGATGCCATTTTCATGTTGCTTAAGTACATTTATGCCTTTTCTGTTTCTGATTATATCTCATGGTTGAGTGCACTTGACTTGGATGGCCATCAGAGCAAACTAAAGAAGGCTATGAGAATCATGAACAAGTATCATGATCCCATCATTGAAGAGAGAATCAAACAATGGAATGATGGATCAAAGACCGATGAAGAGGACTTGCTGGATGTTATGATCTCATTGAAAGACCCATTGTTGACATCGAAGCAAATCAAGGCTCAAATTATAGAATTGATGATGGCAGTGGTGGATAATCCATCAAATGCAGTTGAATGGGCTTTAGCAGAAATGATAAATCAGCCTGAGTTGCTTCAACGAGCTACGGAGGAATTGGACAATGTGGTTGGAAAACATAGGCCGGTCCAGGAATCAGATATTCCTAAACTCAACTATGTGAAGGCTTGCGCAAGAGAAGCTTTTCGCCTTCATCCAATTGTACCTTTTAGTGTTCCCCATGCCTGTATGAATGACACAGTGGTTGCCAATTACTTGATCCCAAAGGGTAGTCATATATTGCTAAGCAGAAGAGGTCTTGGGAGAAACCCAAAAGTTTGGAATGAGCCCCACAAGTTCAAACCAGAACGCCATCTCAAGAGTGATGGTTCTGATGTAGTTTTGTCAGAGCCACACTTGAAGTTCATAACATTCAGCTCGGGAAGGCGTAGTTGTCCTGGAGTGACGCTTGGCACCACAATGACTATAATGTTATTTGCTAGGTTGATCCATGGCTTCACTTGGAGTGCACCTCCCAATGTACCAAGCATCAATCTTGCAGAATCCAAGGATGGTACACTTCTTGCTGAGTCACTTGTGGCTGTTGCAAAGCCAAGATTAGCAATAGACTATGAGTGA 1581 0.4162 MGYDPRFFWFHLQSFWISLLIMIISVFTITKALRFPLIQKPKKPKLPPGPKPWPIVGNLPEMLANKPAFRWIHKLMQEMNTEIACIRLGNVHVITITSPTIACEFLRKHDADFASRPISMSTHIVSSGYVTTALVPYGEQWKKMKKMVANHLFSPMKHQWLQDKRTEEADNLMFYIYNKCKNVNDRGLVNVRDVAQHYCGNVIRKMIFNARYFGKGRKNGGPGFEEAEHVDAIFMLLKYIYAFSVSDYISWLSALDLDGHQSKLKKAMRIMNKYHDPIIEERIKQWNDGSKTDEEDLLDVMISLKDPLLTSKQIKAQIIELMMAVVDNPSNAVEWALAEMINQPELLQRATEELDNVVGKHRPVQESDIPKLNYVKACAREAFRLHPIVPFSVPHACMNDTVVANYLIPKGSHILLSRRGLGRNPKVWNEPHKFKPERHLKSDGSDVVLSEPHLKFITFSSGRRSCPGVTLGTTMTIMLFARLIHGFTWSAPPNVPSINLAESKDGTLLAESLVAVAKPRLAIDYE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4119g00003 526 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 CDD CYP79 81 521 - -
Gabi4119g00003 526 SUPERFAMILY Cytochrome P450 47 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 FunFam Cytochrome P450 9 39 524 - -
Gabi4119g00003 526 Gene3D Cytochrome P450 39 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00003 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Gabi4119g00003 526 PANTHER CYTOCHROME P450 98A9 19 522 - -
Gabi4119g00003 526 Pfam Cytochrome P450 47 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4119g00003 Gabi-Chr4119 50563 52577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4119g00003 14 522 Cytochrome P450 AT5G05260 53.372 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4119g00003 - K14984 gmx:100787378 769.615