Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4119g00002 ATGGGCCATTCCCTCAGTGTTTTGTTGTCACACTTTCAAGTCTTTTGGCTTTCTTTGCTTAGTATAGTCACTAGCCTTACCATTTTCAAAGTCCTAAGATCTCAATTGATTGAGAAATCCAAGAAACCAAAACTCCCACCAGGCCCAAAACCATGGCCTATAGTTGGTAACCTTCCTGAAATGCTTGCAAACAGACCTACATATAAGTGGATACACAAGTTGATGAAAGAAATGAACACTGAAATCGCATGTATCCGCTTAGGAAATGCCAATGTTATCCCAGTTACTTGTCCCACCATTGCCAGTGAATTCTTGAGAAAACATGATGCAACTTTTGCATCAAGATCATTAAGCATGTGCACTGATGTAATCAGTACTGGATATTTAACTGCAATTTTTGCACCCTATGGGGATCAATGGAAGAAAATGAAGAAAATCATAAGCAATGATTTGCTTTCCCCACTCAGGCATCATTGGCTCCAAGACAGAAGGACTGAAGAAGCTGATAACCTTATGTTCTACATCCATAACAAATGCCAAAATCCAAATGGTTGTGGCTTTGTGAATGTTAGGGCTGCTGCACGTGATTATTGTGGTAACGTGATAAGGAAACTTATTTTTAATAAAAGGTACTTTGGAAATGGTGGAAATGCTGGAGGACCAGGTTTTGAGGAAGAAGAACATGTTGATTCCATCTTCACTCTGCTTAAGTACATTTATGCCTTTTCTGTTTCTGATTATTTGCCATGCTTGAGGGGACTTGATTTGGAAGGCCATGAGAATGAGGTAAAGAAAGCTATGGGGATCATAAAAAAGTGTCATGATCCTATCATTGAACAGAGAATCAAACAATGGAATGATGGATTAAAGGTTGAAGTAGAGGATTGGCTTGATATTTTGATCTCCTTGAAAGATGTTAACAATAACCCATCATTGACACAGGAGGAAATCAAGGCGCAAATCATAGAATTGATGCTTGCAACAGTGGACAATCCCTCAAATGCTGTTGAATGGGCACTTGCAGAAATGATAAACCAACCTGAGTTGCTTCAAAGAGCCACTGAAGAATTGGATAATGTTGTAGGAAAAGAAAGGCTAGTCCAAGAATCAGATATTCCAAAGCTCAACTACGTGAAGGCTTGTGCAAGAGAAGTTTTTCGCCTTCATCCAATTGCACCTTTCATTCCTCCCCATGTGGCTATGAATGACACAATAGTTGGTAATTACTTGATCCCTAAGGGTTCTCATGTAGTCCTAAGCAGACAAGAACTTGGGAGAAACTCAAAAGTGTGGAATGAACCCCTCAAGTTCAAACCAGAACGACACCTCAAGAGTGATGGCTCTGATGTCGTTTTGACAGAGCCAAATTTGAAGTTCATAACATTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTTATGCTTGGCACCACAATGACTGTTATGCTATTTGCTAGGTTGATCCATAGTTTCACTTGGAGTGCACCACCCAATGTTTCAAGCATCAACCTTGCTGAGTCCAATGATGATATTCTTCTAGCTAAGCCACTTGTGGTAATGGCAAAGCCAAGGTTAGCAGCAGAGCTCTACCACACATAA 1596 0.4041 MGHSLSVLLSHFQVFWLSLLSIVTSLTIFKVLRSQLIEKSKKPKLPPGPKPWPIVGNLPEMLANRPTYKWIHKLMKEMNTEIACIRLGNANVIPVTCPTIASEFLRKHDATFASRSLSMCTDVISTGYLTAIFAPYGDQWKKMKKIISNDLLSPLRHHWLQDRRTEEADNLMFYIHNKCQNPNGCGFVNVRAAARDYCGNVIRKLIFNKRYFGNGGNAGGPGFEEEEHVDSIFTLLKYIYAFSVSDYLPCLRGLDLEGHENEVKKAMGIIKKCHDPIIEQRIKQWNDGLKVEVEDWLDILISLKDVNNNPSLTQEEIKAQIIELMLATVDNPSNAVEWALAEMINQPELLQRATEELDNVVGKERLVQESDIPKLNYVKACAREVFRLHPIAPFIPPHVAMNDTIVGNYLIPKGSHVVLSRQELGRNSKVWNEPLKFKPERHLKSDGSDVVLTEPNLKFITFSTGRRGCPGVMLGTTMTVMLFARLIHSFTWSAPPNVSSINLAESNDDILLAKPLVVMAKPRLAAELYHT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4119g00002 531 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 FunFam Cytochrome P450 9 38 527 - -
Gabi4119g00002 531 CDD CYP79 80 524 - -
Gabi4119g00002 531 Gene3D Cytochrome P450 38 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 Pfam Cytochrome P450 46 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 SUPERFAMILY Cytochrome P450 46 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00002 531 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 11 530 - -
Gabi4119g00002 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4119g00002 Gabi-Chr4119 43523 45280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4119g00002 10 531 Cytochrome P450 AT4G39950 52.481 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4119g00002 - K14984 gmx:100809902 826.624