Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4119g00001 ATGGGTCATTCCCTCAGTGTTTTGTTTTCACACTTTCAAGTCTTTTGGCTTTCTTTGCTTAGTATAGTCACTAGCCTTACCATTCTCAAAGTCCTAAGATCTCAATTAATTGAGATATCCAAGAAACCAAAACTCCCACCAGGCCCAAAACCATGGCCTATAGTTGGTAACCTTCCTGAAATGCTTGCAAACAGACCTACATATAAGTGGATACACAAGTTGATGAAAGAAATGAACACTGAAATCGCATGTATCCGCTTAGGAAATGCCAATGTAATCCCAGTTACTTGTCCCACCATTGCCAGTGAATTCTTGAGAAAACATGATGCAACTTTTGCATCAAGATCATTAAGCATGTGCACTGATGCAATCAGTAGTGGATATTTAGGTGCAATATTTGCACCCTATGGGGATCAATGGAAGAAAATGAAGAAAATCATAAGCAATGATTTGCTTTCCCCACTCAGGCATCATTGGCTCCAAGACAGAAGGACTGAAGAAGCTGATAACCTTATGTTCTACATCTACAACAAATGCAAAAATCCAAATGATTGTGGCTTTGTGAATGTTAGGGCTGCTGCACGTGATTATTGTGGTAACGTGATAAGGAAACTTATTTTTAATACAAGGTACTTTGGAAATGGTGGTAATGCTGGAGGACCAGGTTTTGAGGAAGAAGAACATGTTGATTCCATCTTCACTTTGCTTAAGTACATTTATGCCTTTTCTGTTTCTGATTATTTGCCATGCTTGAGGGGACTTGATTTGGAAGGCCATGAGAATGAGGTAAAGAAAGCGATGGGGATCATAAAAAAGTATCATGATCCTATCATTGAACAGAGAATCAAACAATGGAATGATGGATTAAAGGTTGAATTAGAAGAGGACTGGCTTGATATTTTGATCTCCTTGAAAGATGTTAACAATAACCCATCATTGACACAAGAGGAAATCAAGGCGCAACTCATAGAATTGATGCTTGCAACAGTGGACAATCCCTCAAATGCTGTTGAATGGGCACTTGCAGAAATGATAAACCAACCTGAGTTGCTTCAAAGAGCCACTGAAGAATTGGATAATGTTGTAGGCAAAGAAAGGCTAGTCCAAGAATCAGATATTCCAAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAACTTTACGCCTTCATCCAATTGCACCTTTCATTCCTCCCCATGTGGCTATGAATGACACAATAGTTGGTAATTACTTGATTCCTAAGGGTTCTCATGTAGTCCTAAGCAGACAAGAACTTGGGAGAAACTCAAAAGTGTGGAATGAACCCCTCAAGTTCAAACCTGAACGCCACCACAAGAATAATGGCTCTGATATCGTTTTGACAGAGCCAGATTTGAGGTTCATAACATTCAGCACGGGAAGGCGTGGTTGTCCTGGAGTGATGCTTGGCACCACAATGACTGTCATGCTATTTGCTAGGTTGATCCATGGTTTCACTTGGAGTGCACCACCCAATGTTTCAAGCATCAACCTTGCTGAGTCCAATGATGATCTTCTTCTAGCTGAGCCACTTGTGGCAATAGCAAAGCCAAGGTTAGCAGCAGAGCTCTACCACACATGA 1599 0.4071 MGHSLSVLFSHFQVFWLSLLSIVTSLTILKVLRSQLIEISKKPKLPPGPKPWPIVGNLPEMLANRPTYKWIHKLMKEMNTEIACIRLGNANVIPVTCPTIASEFLRKHDATFASRSLSMCTDAISSGYLGAIFAPYGDQWKKMKKIISNDLLSPLRHHWLQDRRTEEADNLMFYIYNKCKNPNDCGFVNVRAAARDYCGNVIRKLIFNTRYFGNGGNAGGPGFEEEEHVDSIFTLLKYIYAFSVSDYLPCLRGLDLEGHENEVKKAMGIIKKYHDPIIEQRIKQWNDGLKVELEEDWLDILISLKDVNNNPSLTQEEIKAQLIELMLATVDNPSNAVEWALAEMINQPELLQRATEELDNVVGKERLVQESDIPKLNYVKACARETLRLHPIAPFIPPHVAMNDTIVGNYLIPKGSHVVLSRQELGRNSKVWNEPLKFKPERHHKNNGSDIVLTEPDLRFITFSTGRRGCPGVMLGTTMTVMLFARLIHGFTWSAPPNVSSINLAESNDDLLLAEPLVAIAKPRLAAELYHT 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4119g00001 532 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 12 531 - -
Gabi4119g00001 532 FunFam Cytochrome P450 9 38 528 - -
Gabi4119g00001 532 Gene3D Cytochrome P450 39 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 SUPERFAMILY Cytochrome P450 46 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Gabi4119g00001 532 Pfam Cytochrome P450 46 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4119g00001 532 CDD CYP79 80 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4119g00001 Gabi-Chr4119 26420 28175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4119g00001 10 532 Cytochrome P450 AT4G39950 52.762 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4119g00001 - K14984 gmx:100809902 826.239