Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4116g00041 ATGGCACAGTTACCTCCAAAAATACCACCACCATCAAATTTCACCTCCACCACCACTAGTGACAAACAACAATTGCCATCATGGGTTGACGAGTTCCTCGACTTCTCGTCGTCACGACGGGGTTGTCACCGGAGATCGGCGAGCGACTCGGTTGCCTTCCTCGAGGAATGCCGATTCTCCGATGACGGTGCTGCGACGGCGAGGACCACTGCCCATGCATTCCACGGGTTAGAGGATGACCAGCTCATGTCCATGTTCTGCGACGACATTGCCTTGCCTCAAACGCCGTCGTCGCCATCAGAGCAGAATAGCAACAACAATGAGAAGCCTATGGCATTGGACGTCGTCGTTTCCATGCAATACCTTATTAATCAGCCTAAAAATGAGGCCTGCGAGATGGAAAGCTCATGCCAAAGTGACTCGGCGACGCCACCTTCCCCTACCCCAACAAGCACCGAAACTATCCTAGATCCCAAAAGAGTCAAAAGAGTTTTGGCTAACCGGCAATCAGCTCAGAGGTCGAGGGTGAGAAAGCTACAATACATTTCTGAGCTTGAAAGGAGCGTCACAAGTTTGCAGTCGGAGGTATCAGCATTGTCGCCACGTGTAGCATTCTTGGACCACCAACGTTTGATTCTTAATGTGGACAATAGTACCTTGAAGCAACGGATAGCTGCCTTAGCCCAAGACAAGCTTTTCAAAGATGCTCGCCAAGAAGCATTAAAGAAGGAAATAGATAGACTGAGGCAAATCTATCATCAGCAAAACCAACAGAAGATGGGAAACATGGTCAATAATAATGGCAATTCTATTCATTCTCCATCACCATCACAGCCACAACCATCATTGCCACCCTTTTCTGCATCAGCAGCTAACAACATTTCAGCCCTTCGAATGTAA 900 0.4844 MAQLPPKIPPPSNFTSTTTSDKQQLPSWVDEFLDFSSSRRGCHRRSASDSVAFLEECRFSDDGAATARTTAHAFHGLEDDQLMSMFCDDIALPQTPSSPSEQNSNNNEKPMALDVVVSMQYLINQPKNEACEMESSCQSDSATPPSPTPTSTETILDPKRVKRVLANRQSAQRSRVRKLQYISELERSVTSLQSEVSALSPRVAFLDHQRLILNVDNSTLKQRIAALAQDKLFKDARQEALKKEIDRLRQIYHQQNQQKMGNMVNNNGNSIHSPSPSQPQPSLPPFSASAANNISALRM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4116g00041 299 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 209 IPR004827 GO:0003700|GO:0006355
Gabi4116g00041 299 SMART brlzneu 155 219 IPR004827 GO:0003700|GO:0006355
Gabi4116g00041 299 Coils Coil 238 258 - -
Gabi4116g00041 299 Gene3D - 158 211 - -
Gabi4116g00041 299 FunFam Basic leucine zipper 61 158 231 - -
Gabi4116g00041 299 SUPERFAMILY Leucine zipper domain 159 213 IPR046347 GO:0003700|GO:0006355
Gabi4116g00041 299 MobiDBLite consensus disorder prediction 130 154 - -
Gabi4116g00041 299 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Gabi4116g00041 299 PANTHER BASIC LEUCINE ZIPPER 34 1 281 - -
Gabi4116g00041 299 MobiDBLite consensus disorder prediction 260 276 - -
Gabi4116g00041 299 MobiDBLite consensus disorder prediction 260 294 - -
Gabi4116g00041 299 CDD bZIP_plant_RF2 160 210 IPR044759 GO:0003700|GO:0006355
Gabi4116g00041 299 MobiDBLite consensus disorder prediction 1 25 - -
Gabi4116g00041 299 Pfam bZIP transcription factor 159 203 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4116g00041 Gabi-Chr4116 736989 739603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4116g00041 1 236 bZIP Transcription Factor Family AT2G42380 49.817 1.16e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4116g00041 bZIP_1 1.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4116g00041 - - qsa:O6P43_001014 302.753