Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4116g00022 ATGGTGGGAACTCCAATTAACGGAAGAACAAGGCCAACTTTTGCAGTTGTAAATGGTGGACATGATCTTGGCCCGAGTAGTACTCCAACAAGCAATGCTGGGTCAGATAACGGAATTATAGAATTCACAAGAGAGGATGTGGAGGCTTTGCTGAATGAGAAAGCCAAAAGGAAGGACAGGTTTAATTATAAGGAAAGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACCTAGAGATGAGCTACTCACTTGAGCAAGAAAAGTTAAAGAATTCTTTGGAATTAGCCCAGCAAAAATCCATGGAAATAGAGTTGCTGCTCAAAATCAAGGAAGAAGAACTAAATTCAATTATTGTGGAAATGAGAAGGAATTGCACTTCTCTGCAAGAGAAATTAATGAAGGAAGAATCAGATAAATCAGTGGCAATGGAATCTCTTGTTAAAGAGAGAGAAGCTAGGCTTAACATTGAGAGGTCGCAGACTACACTAACGGAGGATCTTGGAAGAGCTCAACGAGAGCTCCAAGGTGCAAATCAGAAGATATCATCCCTCAATGACATGTATAAGCAGTTACAAGATTACATATCAAGCTTACAGCAGTACAATGGAAAACTTCATTCAGAGCTTTCTTCGGTTGAGGAAGAACTTAAGCGTGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAACCTCACCATGTTAAAGGGCCAACTTACTTTGTCTGTGTCTTCTCAAGAAGAGGCCACTAAACAGAAGGATGCTTTGGCTAGTGAAGTTGCATCTCTTCGAGTAGAGTTGCAACTAGTTAGGGATGATCGCGACTGCAAATTATCTCAAGTGCAAACTTTATCTTCTGAATTAGTGAAGTTTAAAGATTCTTCAGAAAAGTCCTGCTCTGAACTGGACAACTTGACTATAAAAACAAATGAACTAGAGGAAAAATGTGCTTTGCAAGATAACCAGATAAAGGCATTACAAGAACTGCTAACAACTGCAGAGAAGAAACTACAGGTTTCTGATATATCTGCAATTGAGACAAGAACAGAATATGAAGAGCAACAAAAACTTGTAGATGAGTTGCAGACACGCTTGGAAGATGCAGAATATAAACTTATAGAAGGGGAGAAGCTGAGGAAAGAATTACATAATACCATTTTGGAACTAAAAGGGAACATCCGCGTGTTCTGTAGAGTGCGGCCTTTGTTACCTGATGAAGGTTGTAGCACAGAAGGCAAGATTATATCTTATCCCACATCAATGGAAGCTTCTGGACGAGGCATTGAATTGACCCAAAGTGGCCAAAAACATTGTTTTACATTTGATAAAGTTTTTGCACCCGACGCATCACAAGAAGAAGTTTTCATAGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATATTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGAAGGCCTGGACATCCAGAAGAAAAGGGCCTGATACCTCGTTCACTAGAACAAATATTTCAAACAAGACAATCTCTGCAATCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGCTGGAAATATACAATGAAACCATTCGTGATCTGTTGTCTACAAATAAGTCAACATCAGATGCAACACGCCTAGAAAATGGTTCTCCTGGAAAGCAATACACAATCAAACATGATGCAAATGGAAATACACACGTGTCTGATCTTACAATAGTGGATGTTAAGAGTATAAGAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAGTAGCAGATCTGTGGGAAAAACTCAGATAAATGAACAATCTTCAAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTATTCTAAATCTTATTGATCTTGCTGGGAGTGAACGCCTTTCAAAGAGTGGATCAACCGGTGACCGGTTAAAAGAAACTCAAGCAATAAATAAAAGTCTATCATCATTAAGTGATGTGATATTTGCCTTGGCCAAAAAGGAGGATCATGTCCCATTCAGGAACTCAAAGCTTACATATCTACTTCAGCCATGTCTTGGTGGGGACTCAAAGACATTAATGTTTGTAAACATCTCACCTGAACATTCTTCAGCGGGTGAGTCACTATGCTCACTAAGGTTTGCGTCAAGAGTGAATGCTTGTGAAATTGGGACACCTCGGCGTCACACAAACGGACGTCCTACAGAGTCTCGCTTGAGCTATTTCTAA 2283 0.3955 MVGTPINGRTRPTFAVVNGGHDLGPSSTPTSNAGSDNGIIEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEMSYSLEQEKLKNSLELAQQKSMEIELLLKIKEEELNSIIVEMRRNCTSLQEKLMKEESDKSVAMESLVKEREARLNIERSQTTLTEDLGRAQRELQGANQKISSLNDMYKQLQDYISSLQQYNGKLHSELSSVEEELKRVEKEKATVVENLTMLKGQLTLSVSSQEEATKQKDALASEVASLRVELQLVRDDRDCKLSQVQTLSSELVKFKDSSEKSCSELDNLTIKTNELEEKCALQDNQIKALQELLTTAEKKLQVSDISAIETRTEYEEQQKLVDELQTRLEDAEYKLIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGCSTEGKIISYPTSMEASGRGIELTQSGQKHCFTFDKVFAPDASQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTRQSLQSQGWKYEMQVSMLEIYNETIRDLLSTNKSTSDATRLENGSPGKQYTIKHDANGNTHVSDLTIVDVKSIREVAFLLNQAASSRSVGKTQINEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPEHSSAGESLCSLRFASRVNACEIGTPRRHTNGRPTESRLSYF 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4116g00022 760 Coils Coil 309 343 - -
Gabi4116g00022 760 SMART kinesin_4 397 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00022 760 SUPERFAMILY Tropomyosin 209 395 - -
Gabi4116g00022 760 Coils Coil 102 147 - -
Gabi4116g00022 760 Coils Coil 169 203 - -
Gabi4116g00022 760 MobiDBLite consensus disorder prediction 18 37 - -
Gabi4116g00022 760 Coils Coil 40 60 - -
Gabi4116g00022 760 MobiDBLite consensus disorder prediction 552 572 - -
Gabi4116g00022 760 Gene3D Kinesin motor domain 341 741 IPR036961 -
Gabi4116g00022 760 Pfam Kinesin motor domain 405 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00022 760 Coils Coil 211 245 - -
Gabi4116g00022 760 MobiDBLite consensus disorder prediction 23 37 - -
Gabi4116g00022 760 CDD KISc_C_terminal 397 741 - -
Gabi4116g00022 760 Coils Coil 253 273 - -
Gabi4116g00022 760 PRINTS Kinesin heavy chain signature 640 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00022 760 PRINTS Kinesin heavy chain signature 609 626 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00022 760 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00022 760 PRINTS Kinesin heavy chain signature 689 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00022 760 ProSiteProfiles Kinesin motor domain profile. 399 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00022 760 FunFam Kinesin-like protein 345 741 - -
Gabi4116g00022 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 737 IPR027417 -
Gabi4116g00022 760 PANTHER KINESIN-LIKE PROTEIN KLP-3 249 746 IPR027640 GO:0003777|GO:0007018
Gabi4116g00022 760 Coils Coil 351 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4116g00022 Gabi-Chr4116 429524 435652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4116g00022 68 751 Calmodulin-binding Proteins AT5G65930 31.884 5.69e-80 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4116g00022 K10405 - gmx:100801196 1287.32