Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4116g00021 ATGCTCATATTTGAGGAAAGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACCTAGAGATGAGCTACTCACTTGAGCAAGAAAAGTTAAAGAATTCTTTGGAATTAGCCCAGCAAAAATCCATGGAAATAGAGTTGCTGCTCAAAATCAAGGAAGAAGAACTAAATTCAATTATTGTGGAAATGAGAAGGAATTGCACTTCTCTGCAAGAGAAATTAATGAAGGAAGAATCAGATAAATCAGTGGCAATGGAATCTCTTGTTAAAGAGAGAGAAGCTAGGCTTAACATTGAGAGGTCGCAGACTACACTAACGGAGGATCTTGGAAGAGCTCAACGAGAGCTCCAAGGTGCAAATCAGAAGATATCATCCCTCAATGACATGTATAAGCAGTTACAAGATTACATATCAAGCTTACAGCAGTACAATGGAAAACTTCATTCAGAGCTTTCTTCGGTTGAGGAAGAACTTAAGCGTGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAACCTCACCATGTTAAAGGGCCAACTTACTTTGTCTGTGTCTTCTCAAGAAGAGGCCACTAAACAGAAGGATGCTTTGGCTAGTGAAGTTGCATCTCTTCGAGTAGAGTTGCAACTAGTTAGGGATGATCGCGACTGCAAATTATCTCAAGTGCAAACTTTATCTTCTGAATTAGTGAAGTTTAAAGATTCTTCAGAAAAGTCCTGCTCTGAACTGGACAACTTGACTATAAAAACAAATGAACTAGAGGAAAAATGTGCTTTGCAAGATAACCAGATAAAGGCATTACAAGAACTGCTAACAACTGCAGAGAAGAAACTACAGGTTTCTGATATATCTGCAATTGAGACAAGAACAGAATATGAAGAGCAACAAAAACTTGTAGATGAGTTGCAGACACGCTTGGAAGATGCAGAATATAAACTTATAGAAGGGGAGAAGCTGAGGAAAGAATTACATAATACCATTTTGGAACTAAAAGGGAACATCCGCGTGTTCTGTAGAGTGCGGCCTTTGTTACCTGATGAAGGTTGTAGCACAGAAGGCAAGATTATATCTTATCCCACATCAATGGAAGCTTCTGGACGAGGCATTGAATTGACCCAAAGTGGCCAAAAACATTGTTTTACATTTGATAAAGTTTTTGCACCCGACGCATCACAAGAAGAAGTTTTCATAGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATATTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGAAGGCCTGGACATCCAGAAGAAAAGGGCCTGATACCTCGTTCACTAGAACAAATATTTCAAACAAGACAATCTCTGCAATCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGCTGGAAATATACAATGAAACCATTCGTGATCTGTTGTCTACAAATAAGTCAACATCAGATGCAACACGCCTAGAAAATGGTTCTCCTGGAAAGCAATACACAATCAAACATGATGCAAATGGAAATACACACGTGTCTGATCTTACAATAGTGGATGTTAAGAGTATAAGAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAGTAGCAGATCTGTGGGAAAAACTCAGATAAATGAACAATCTTCAAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTATTCTAAATCTTATTGATCTTGCTGGGAGTGAACGCCTTTCAAAGAGTGGATCAACCGGTGACCGGTTAAAAGAAACTCAAGCAATAAATAAAAGTCTATCATCATTAAGTGATGTGATATTTGCCTTGGCCAAAAAGGAGGATCATGTCCCATTCAGGAACTCAAAGCTTACATATCTACTTCAGCCATGTCTTGGTGGGGACTCAAAGACATTAATGTTTGTAAACATCTCACCTGAACATTCTTCAGCGGGTGAGTCACTATGCTCACTAAGGTTTGCGTCAAGAGTGAATGCTTGTGAAATTGGGACACCTCGGCGTCACACAAACGGACGTCCTACAGAGTCTCGCTTGAGCTATTTCTAA 2106 0.3922 MLIFEERCENMMDYIKRLKVCIRWFQDLEMSYSLEQEKLKNSLELAQQKSMEIELLLKIKEEELNSIIVEMRRNCTSLQEKLMKEESDKSVAMESLVKEREARLNIERSQTTLTEDLGRAQRELQGANQKISSLNDMYKQLQDYISSLQQYNGKLHSELSSVEEELKRVEKEKATVVENLTMLKGQLTLSVSSQEEATKQKDALASEVASLRVELQLVRDDRDCKLSQVQTLSSELVKFKDSSEKSCSELDNLTIKTNELEEKCALQDNQIKALQELLTTAEKKLQVSDISAIETRTEYEEQQKLVDELQTRLEDAEYKLIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGCSTEGKIISYPTSMEASGRGIELTQSGQKHCFTFDKVFAPDASQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTRQSLQSQGWKYEMQVSMLEIYNETIRDLLSTNKSTSDATRLENGSPGKQYTIKHDANGNTHVSDLTIVDVKSIREVAFLLNQAASSRSVGKTQINEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPEHSSAGESLCSLRFASRVNACEIGTPRRHTNGRPTESRLSYF 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4116g00021 701 Coils Coil 152 186 - -
Gabi4116g00021 701 FunFam Kinesin-like protein 286 682 - -
Gabi4116g00021 701 Coils Coil 194 214 - -
Gabi4116g00021 701 Coils Coil 250 284 - -
Gabi4116g00021 701 MobiDBLite consensus disorder prediction 493 513 - -
Gabi4116g00021 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 297 678 IPR027417 -
Gabi4116g00021 701 PRINTS Kinesin heavy chain signature 630 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00021 701 PRINTS Kinesin heavy chain signature 581 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00021 701 PRINTS Kinesin heavy chain signature 416 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00021 701 PRINTS Kinesin heavy chain signature 550 567 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00021 701 PANTHER KINESIN-LIKE PROTEIN KLP-3 197 687 IPR027640 GO:0003777|GO:0007018
Gabi4116g00021 701 Coils Coil 110 144 - -
Gabi4116g00021 701 Pfam Kinesin motor domain 346 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00021 701 Gene3D Kinesin motor domain 283 682 IPR036961 -
Gabi4116g00021 701 SMART kinesin_4 338 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00021 701 Coils Coil 292 326 - -
Gabi4116g00021 701 ProSiteProfiles Kinesin motor domain profile. 340 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4116g00021 701 Coils Coil 43 88 - -
Gabi4116g00021 701 CDD KISc_C_terminal 338 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4116g00021 Gabi-Chr4116 428270 435652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4116g00021 7 692 Calmodulin-binding Proteins AT5G65930 31.792 3.16e-80 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4116g00021 K10405 - gmx:100801196 1174.07