Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4116g00018 ATGGCAATTCAACAATATATGAAGGCTAGCTTTTGCATTGTTTTGGCTCTTAACATTGTGGCAACCCTCAGCATTGTAGAAAAGACGGCAACACAAGAAGAATTCCTTAGCCAACTATTTGATCCAGCATCTGGACTATTAGATGAGGACACGGCAGAAGTACTATGGATCACTTGCGGTGAAGATTTGATTCATTCAAAGAAAGGAGTTGGAGATCTTGACTTATGCCTCCAGAAGGAATCACCAAGTAGCACCAATGAAATTAGTTCCGAAAATGGATCAATAGCAAGAGAAAACATCAGAAAATTGTTTAATACTTGCAATCCTCAGTTGAAGGAAAATTTTCTTCACTGTTTGAGAAAAAATAATTTTCCATTCCATGTCTATGGAGAAGAGGATGACTCCAAGATTTGGCATGCCCCTTATATGGTATCACTTTCTTCCAGAAGAAATCTGGGTCATGTTTTGCCCCAGCACTTATCAGAAACACCAGAAAATGAAGATGAATCACCTTCAAAATCCAGTCCTAAAGGTGGTAAACCTGATAAGAAAAAAAAAAAGTCCAAGTCATCTGATCATAGTGATCACAAGAAAACAGTTGCACTTGCCATAGCTATAACTGCAGTGGTGACATTTCTGGGTGCAGCACTTATCTTTATATGTTGTTGTCGGTGTTGTGGGAGTGGCCGAGTTAGACAAAATGATGAGAGGCCCCTTCTCAGCATGAGCAAGAGTGACTACTCCGTTGGTTCTTCTTCCAATAATAATGCGTTTAGAAATTCAATGAAAGAGGAGAAACTCGGGTTTCAATCATCTTTGGTTGATGACAAGAACTCAATGCAGGAAATTCAATTAGCAGGAGTTGCAAGACCATCATTTGAACTTAAACCTCCACCTGGTAGGGTAGGAACTGGAATGCCACCTTTGAAACCTCCTCCTGGTAGACCTGATCCTCTTCCTCCTGAGCCACCTTCTAAGCTTTCTGATTATGCCACTACTCCTCCTTCTGCTCCTCCTCCTCCACCACCAAGGCCTGGTAGTGGTGGCTCTCCACCTCCTCCACCCCCAAAACCTGGCAGTGGCGGTCCTAAGCCTCCTCCACCACCTCCACCTGGTGCCAAACCTGGTCCACGTCCACCACCACCTCCTAAGGGTGGTGTAGGTCCTCCTAGAGCTCCTCCTCCAATTGGCCCAAAAGGGCCTAGACCTTTGGCTGGTGTACCAAAGCCTCAAGGGAAAGTTGGAGATGCTTCAGAAGGTGATGCTGATGCTGATGCTCCTAAAGCTAAGCTAAAGCCTTTCTTCTGGGATAAGGTTCAAGCCAACTCAGATCAAACCATGGTTTGGAATCAGATCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAAACGCTTTTTGGCTATACTGCTGCGCCTGTGGATAAAAACAAAGGAGTACAGAAGAAGAAAGAATCTTCATCCCTGGATCCTTTTCAGTTTATCCAGATCATTGACTCCAAGAAATCACAAAATTTATCAATTCTGTTGAAAGCATTGAATGTGACACTAGAAGAAGTTTGTGATGCAATTCTTGAAGGGAATGAGCTCCCCCCAGAATTTATTCAAACCTTGCTGAAGATGGCACCAACGTCAGAGGAAGAACTCAAGCTAAGGCTTTTCAGTGGTAACCTAGCACAACTTGGGCCTGCTGATCGATTCCTGAAAGCCCTGATTGAAATTCCATTTGCCTTCAAACGAATGGAAGCACTGCTTTATATGTGTACTCTTGAAGAGGAGCTCACTGTTACCACAGAGTCTTTTGCAACTTTAGAGGTTGCATGTAAGGAATTAAGAAGCAGCAGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGGAACCGTATGAATGATGGCACATTCCGTGGTGGTGCACTAGCATTTAAACTTGATACACTACTCAAATTGTCAGATGTAAAAGGAGTAGATGGAAAAACGACTCTCTTACACTTCGTTGTTCAAGAGATAATACGCACTGAGGGCATAAGAGCTGCTCGTATGGCAAAAGAGAGCCTTAGTTTCTCTAGCATTAAAACAGATGACCTTCTTGAAGACATATCTCATGAATCAGAAGACCACTATCGTGAACTTGGTCTTCAAGTTGTTTCACGTCTGAGTAATGAACTTGAGAATGTGAAGAAAGCAGCAGCACTAGATGCTGATGGCTTAACAGGAACAACTGCAAGGCTTGGCCATGGTCTCATAAAAACAAGAGACTTTGTAAACAAAGACCTGAAGAAAGAAGAGGATGATGATAAAGGGTTTCATGACACGGTTAAGAGCTTTGTGGAGAAAGCTGAGGCTGATGTCACGAGTCTTCTAGAAGAAGAGAAGAAAATCATGGCTCTGGTGAAGAGCACTGGTGATTACTTTCATGGGAATTCAGGGAGGGATGAAGGCTTAAGATTGTTTGTAATAGTACGTGACTTCTTGATAATGGTAGATAAGATATGCAAGGAGATAAAAAATGCACCAAAGAAACCAGCTCCAGCAAAAAATGTGAAACAAAATACTTCTAGTTCTAGAGGATCATCTACCTCAGAAACTCGTCCTCCACCTAATTTTCGTCAGCAACTTTTTCCACCAGTTGCAGATAGGGGGGTGGATGATTTTAGTTCAGATGATGAGAGTCCATAG 2685 0.4264 MAIQQYMKASFCIVLALNIVATLSIVEKTATQEEFLSQLFDPASGLLDEDTAEVLWITCGEDLIHSKKGVGDLDLCLQKESPSSTNEISSENGSIARENIRKLFNTCNPQLKENFLHCLRKNNFPFHVYGEEDDSKIWHAPYMVSLSSRRNLGHVLPQHLSETPENEDESPSKSSPKGGKPDKKKKKSKSSDHSDHKKTVALAIAITAVVTFLGAALIFICCCRCCGSGRVRQNDERPLLSMSKSDYSVGSSSNNNAFRNSMKEEKLGFQSSLVDDKNSMQEIQLAGVARPSFELKPPPGRVGTGMPPLKPPPGRPDPLPPEPPSKLSDYATTPPSAPPPPPPRPGSGGSPPPPPPKPGSGGPKPPPPPPPGAKPGPRPPPPPKGGVGPPRAPPPIGPKGPRPLAGVPKPQGKVGDASEGDADADAPKAKLKPFFWDKVQANSDQTMVWNQIKAGSFQFNEEMMETLFGYTAAPVDKNKGVQKKKESSSLDPFQFIQIIDSKKSQNLSILLKALNVTLEEVCDAILEGNELPPEFIQTLLKMAPTSEEELKLRLFSGNLAQLGPADRFLKALIEIPFAFKRMEALLYMCTLEEELTVTTESFATLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIIRTEGIRAARMAKESLSFSSIKTDDLLEDISHESEDHYRELGLQVVSRLSNELENVKKAAALDADGLTGTTARLGHGLIKTRDFVNKDLKKEEDDDKGFHDTVKSFVEKAEADVTSLLEEEKKIMALVKSTGDYFHGNSGRDEGLRLFVIVRDFLIMVDKICKEIKNAPKKPAPAKNVKQNTSSSRGSSTSETRPPPNFRQQLFPPVADRGVDDFSSDDESP 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4116g00018 894 MobiDBLite consensus disorder prediction 161 178 - -
Gabi4116g00018 894 MobiDBLite consensus disorder prediction 841 894 - -
Gabi4116g00018 894 MobiDBLite consensus disorder prediction 287 428 - -
Gabi4116g00018 894 Gene3D Formin, FH2 domain 426 865 IPR042201 -
Gabi4116g00018 894 ProSiteProfiles Formin homology-2 (FH2) domain profile. 421 856 IPR015425 -
Gabi4116g00018 894 SMART it6_source 421 845 IPR015425 -
Gabi4116g00018 894 MobiDBLite consensus disorder prediction 848 870 - -
Gabi4116g00018 894 SUPERFAMILY Formin homology 2 domain (FH2 domain) 366 842 - -
Gabi4116g00018 894 PANTHER FORMIN-RELATED 136 882 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi4116g00018 894 Pfam Formin Homology 2 Domain 423 830 IPR015425 -
Gabi4116g00018 894 MobiDBLite consensus disorder prediction 160 194 - -
Gabi4116g00018 894 MobiDBLite consensus disorder prediction 301 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4116g00018 Gabi-Chr4116 359310 363857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4116g00018 396 885 FH2 protein (formin) Gene Family AT5G54650 65.173 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4116g00018 - - gmx:100782988 712.22