Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00048 ATGGAACTAAGCATCATGTTTTGCTTGTTTGCTTCTTTTCTTTTTATTGTTCTATTCAGGATATTCTTTGTCTCAAAACGCCGTGACTTGCCACTCCCACCTGGTTCCATGGGTTGGCCTTACGTAGGAGAAACCTTTCAAATGTATTCTCAAGACCCAAGTGTTTTCTTTGCCACAAAAATAAAAAGGTATGGCTCTATGTTCAAGTCCCACATTCTGGGTTGTCCCTGTGTGATGATTTCAAGCCCTGAGGCTGCAAAGTTTGTGCTGAACAAGGCTCAACTATTCAAGCCAACATTCCCAGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTCACCAAGGAGAGTATCATGCTAACTTGAGAAGGCTTGTCCTTCGTACCTTCATGCCTGAAGCCATAAAAAACATCGTGTATGACATTGAATCCATTGCTCAAGATTGTCTCAAATCATGGGAAGGCCGTTTGATCACCACTTTTCTTGAAATGAAGACGTTCACCTTCAATGTTGCTCTGCTATCAATTTTTGGAAAGGATGAAATTCTATACAGAGAGCGTTTGAAGAAGTGTTACTACACACTTGAGAAAGGGTACAATTCAATGCCGATTAATCTTCCTGGGACACTGTTCCACAAGGCTATGAAGGCAAGGAAAGAGCTTGCACAGATCTTGGCCCAAATAATCTCAAGCAGGAGGCAGAAGAAGCAAGATTACAAGGACTTGCTTGGTTCATTCATGGGTGAGAAATCGGGTCTCACCGACGAACAGATAGCAGATAATGTAATCGGTGTCATATTTGCAGCTCGTGACACCACGGCCAGTGTGCTTACGTGGATTGTCAAGTACCTTGGTGAAAACCCCACTGTCCTTCAAGCTGTGACTGAGGAGCAAGAGTGCATATTGAAGAACAAGGAAGAAAGTGGTGAAGAGAAGGGTCTGAATTGGGAAGATGCCAAAAAGATGCCAATCACTTCAAGGGTTATACAAGAGACTCTCAGAGTTGCCTCAATTTTGTCCTTTACTTTTAGAGAAGCAGTAGAGGATGTTGAATATCAAGGGTACCTTATACCGAAAGGGTGGAAAGTACTGCCACTCTTTAGGAACATACACCACAGTCCAGATAACTTCAAAGAGCCTGAAAGATTTGATCCCTCAAGATTTGAGGCTGCTCCAAAACCCAATACCTTTATGCCATTTGGAAGTGGGATCCATGCATGTCCTGGGAATGAATTAGCCAAATTGGAGATTTTAGTCCTCCTACATCATCTGACCACAAAGTACAGGTGGTCTGTGGTGGGTGCAAAGAATGGGATTCAGTATGGCCCTTTTGCTCTTCCCCAGAATGGCTTGCCTATCACATTATATCTCAAATAG 1383 0.4295 MELSIMFCLFASFLFIVLFRIFFVSKRRDLPLPPGSMGWPYVGETFQMYSQDPSVFFATKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVYDIESIAQDCLKSWEGRLITTFLEMKTFTFNVALLSIFGKDEILYRERLKKCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAQIISSRRQKKQDYKDLLGSFMGEKSGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPTVLQAVTEEQECILKNKEESGEEKGLNWEDAKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPERFDPSRFEAAPKPNTFMPFGSGIHACPGNELAKLEILVLLHHLTTKYRWSVVGAKNGIQYGPFALPQNGLPITLYLK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00048 460 Gene3D Cytochrome P450 23 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 Pfam Cytochrome P450 33 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 SUPERFAMILY Cytochrome P450 26 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 CDD CYP90-like 61 457 - -
Gabi4108g00048 460 PANTHER CYTOCHROME P450 26 30 437 - -
Gabi4108g00048 460 FunFam Abscisic acid 8 23 459 - -
Gabi4108g00048 460 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Gabi4108g00048 460 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4108g00048 460 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00048 Gabi-Chr4108 586329 588538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00048 1 455 Cytochrome P450 AT4G19230 72.294 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00048 K09843 - gmx:100170674 868.226