Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00032 ATGCCACAGAACTGCATAGCACCAAAACCTGAATACTGCAATAGCCACTCTGTGGAAGGACCACCAGAGATGACCGAGCCCCATAACTCAAGTGTCCTTGCCTACCCCATACGAACCAATGAACAATCTTTCCCAAAACTCACTATGCACCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTTAAACTAGAGGAGAAAGGAATGTGTTGGGGCAGTACATGGACTTGCAAAGAGAAGACCATATTGAATGGAATCACAGGTGTTGTATGCCCAGGAGAAATTCTTGCTATGCTGGGACCATCAGGTAGTGGCAAAACCACACTTCTCACAGCTCTTGGAGGCCGTCTCAGTGGTAAACTATCTGGAAAGATCACATACAACTCTCAGCCTTTCTCAGGTGCCATAAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCATCTGACAGTCACAGAAACACTAGTGTTCACTGCACTTTTAAGGCTTCCCAACAGCTTGACCCGAGATGAAAAAGTTCAGCATGTAGAGAGAGTTATCACTGAGCTAGGACTAACTCGTTGCAGGAGCAGCATGATAGGAGGACCACTTTTCAGAGGAATATCAGGTGGGGAGAAAAAGAGGGTGAGCATAGGTCAAGAAATGCTCATCAATCCAAGCCTTTTGTTGCTAGATGAGCCCACTTCAGGTTTGGATTCCACCACTGCTCAAAGGATCCTAAAAACAATCAAACGCTTGGCTAGTGGTGGTAGAACTGTTGTCACCACCATTCATCAACCCTCAAGTCGCCTCTACTATATGTTTGATAAGGTGGTGTTGCTCTCTGAAGGGTGCCCCATATATTATGGTCCTGCTTCAACTGCCTTAGAGTACTTCTCATCTGTTGGTTTTTCAACATGTGTTACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCGGACTCCAAGCATTCAACTGAACAAAGTGAGGGGCTGGAACAAGAGAGGAAGCTGGTGAGAGAATCTCTAATATCTGCTTATGACAAGAACATAGCTACAAGGCTGAAAGCTGAGGTTTGCAGCTTGGAAGTGAACAACTACAACATCACAAAAGATGCTTGCTCAAGAATTCCCATAAAATCAGAGCAATGGAGCACAAGCTGGTGGCATCAGTTCAAGGTACTATTACAGAGGGGAGTGAGGGAGCGAAGGCATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTGGCGTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAGTCACATATTGAAGACCGGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCTCAAGAGAGGAGAATGCTGATCAAGGAACGTTCATCAGGAATGTACCGGCTTTCTTCCTATTTCCTTGCTAGAACAATAGGAGACTTGCCACTGGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTTTGACTTTTATCCTTTCACTTCTTGTGGTTCTTTACAGTGTTCTTGTATCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCCACTACTCTAGCTTCTGTCACAACCCTTGTATTTCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCCTTCATAGCATGGCTCAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTACTTCTCGGTGTTCAGTACAATGATAATGATTATTATGAATGCTCAAACGGGGTGTTGTGCAAGGTTGCAGATTTTCCTCCAATCAAATCAATGGGTTTGAATTATATGTGGGTTGATGTGTCCATTATGGCCTTGATGTTGGTGGGTTATCGACTAGTTGCTTATTTAGCACTGCATAGAGTTAGGTAG 1968 0.4405 MPQNCIAPKPEYCNSHSVEGPPEMTEPHNSSVLAYPIRTNEQSFPKLTMHPITLKFEELVYKVKLEEKGMCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNSQPFSGAIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILKTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTCVTVNPADLLLDLANGIAPDSKHSTEQSEGLEQERKLVRESLISAYDKNIATRLKAEVCSLEVNNYNITKDACSRIPIKSEQWSTSWWHQFKVLLQRGVRERRHEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPLTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIAWLKYLSYSYYCYKLLLGVQYNDNDYYECSNGVLCKVADFPPIKSMGLNYMWVDVSIMALMLVGYRLVAYLALHRVR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00032 655 Pfam ABC transporter 85 234 IPR003439 GO:0005524
Gabi4108g00032 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 648 - -
Gabi4108g00032 655 SMART AAA_5 93 283 IPR003593 GO:0016887
Gabi4108g00032 655 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524|GO:0016887
Gabi4108g00032 655 CDD ABCG_EPDR 51 288 - -
Gabi4108g00032 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 306 IPR003439 GO:0005524
Gabi4108g00032 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 298 IPR027417 -
Gabi4108g00032 655 FunFam ABC transporter G family member 22 71 300 - -
Gabi4108g00032 655 Pfam ABC-2 type transporter 263 339 IPR043926 GO:0140359
Gabi4108g00032 655 Pfam ABC-2 type transporter 394 599 IPR013525 GO:0016020|GO:0140359
Gabi4108g00032 655 Gene3D - 73 300 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00032 Gabi-Chr4108 338826 341932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00032 83 282 Calmodulin-binding Proteins AT2G36910 29.858 1.04e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00032 K05681 - gmx:100794774 1205.28