Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00030 ATGGCAGCAGCTTCAGGATCAGTGGGGGGTGACACAAGGAAGGCCCATTTGGCCATGGCGATGGTGCAGCTATTGTATGGAGGCTACCATGTCATCACCAAAGTGGCTCTTAATGTTGGGGTCAACCAATTCGTCTTCTGTGTTTACCGGGATCTCATTGCCCTTGCTATTCTTGCTCCTCTCGCTTTTTTCTATGAAAGGCATACAAGACCACCCATTACTAAGCAGCTACTGTTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTCTTGTTTCTTATTGGTTTAGGCTATACTAATCCAACTTATGCTGCTGCCATACAGCCAGCCATTCCAGTCTTTACATTTCTTTTTACTGTCATGATGGGTACAGAAAGAGTGAACGTGCTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTGTGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGCCTTGATAGGACATGCAGAAATTGTCCATGTAGCACAAAGTGAAATAAGTGCCAGGGGTCAGCCAGAGCCTTCTGGATGGTTAATCAGTGGTTTACAGGATCTTGGATTAGACCATTTTCAACTTGGGGTTATGTGCTTGATAGGGAATTGCATGTGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAAAAAGTATCCCACAAACCTATCTGTCACAGCGTATTCATTCTTCTTTGGAGCTGTACTAATGGTGATAGTATCGTTATTCGTGACTAATGAGTCAACTGACTGGATTTTGACTCAATCAGAAATACTTGCTGTTATTTATGCCGGAACTATTGCATCTGCCCTTAACTATGGACTCGTCACATGGTGCAACAAGATCTTGGGGCCAGCTTTAGTTTCCCTTTATAATCCACTTCAACCTGCGTTTTCTGCCCTTCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGTGGATCTTTTATCATTGCGGGTCTATATACGGTTACTTGGGCATCTTATAGAGAAAGACAGGCAACTGTTGGAGTCACTGAACCACTTATTCATGAAAGAAGTGCATACCAGAGAGGTCAAATATTTTCGGAGTCCTCCAGCGTATCACCAAACCCCAAGTCATCAGAAGATTAA 1158 0.4326 MAAASGSVGGDTRKAHLAMAMVQLLYGGYHVITKVALNVGVNQFVFCVYRDLIALAILAPLAFFYERHTRPPITKQLLLSFFFLGLTGIFGNQLLFLIGLGYTNPTYAAAIQPAIPVFTFLFTVMMGTERVNVLRYEGLAKVGGTLICVCGAILMVLYRGPALIGHAEIVHVAQSEISARGQPEPSGWLISGLQDLGLDHFQLGVMCLIGNCMCMAAFLAIQAPVLKKYPTNLSVTAYSFFFGAVLMVIVSLFVTNESTDWILTQSEILAVIYAGTIASALNYGLVTWCNKILGPALVSLYNPLQPAFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWASYRERQATVGVTEPLIHERSAYQRGQIFSESSSVSPNPKSSED 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00030 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 345 - -
Gabi4108g00030 385 Pfam EamA-like transporter family 16 156 IPR000620 GO:0016020
Gabi4108g00030 385 Pfam EamA-like transporter family 203 340 IPR000620 GO:0016020
Gabi4108g00030 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Gabi4108g00030 385 PANTHER WAT1-RELATED PROTEIN 17 347 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00030 Gabi-Chr4108 296632 301171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00030 98 360 Nodulin-like Gene Family AT5G45370 64.234 1.10e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00030 - - psat:127119930 583.563