Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00028 ATGCTCTCGTCCCAACCTACTAACTCCTGTATATCAACTAAGCTACTACTTCCATTTGGATCAGTGGGGGGTGACACAAGGAAGGCCCATTTGGCCATGGCGATGGTGCAGCTATTGTATGGAGGCTACCATGTCATCACCAAAGTGGCTCTTAATGTTGGGGTCAACCAATTCGTCTTCTGTGTTTACCGGGATCTCATTGCCCTTGCTATTCTTGCTCCTCTCGCTTTTTTCTATGAAAGACAGACAAGACCACCCATTACTAAGCAGCTACTGTTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTCTTGTTTCTTATTGGTTTAGGCTATACTAATCCAACTTATGCTGCTGCCATACAGCCAGCCATTCCAGTCTTTACATTTCTTTTTACTGTCATGATGGGTACAGAAAGAGTGAACGTGCTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTGTGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGCCTTGATAGGACATGCAGAAATTGTCCATGTAGCACAAAGTGAAATAAGTGCCAGGGGTCAGCCAGAGCCTTCTGGATGGTTAATCAGTGGTTTACAGGATCTTGGATTAGACCATTTTCAACTTGGGGTTATGTGCTTGATAGGGAATTGCATGTGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAAAAAGTATCCCACAAACCTATCTGTCACAGCGTATTCATTCTTCTTTGGAGCTGTACTAATGGTGATAGTATCGTTATTCGTGACTAATGAGTCAACTGACTGGATTTTGACTCAATCAGAAATACTTGCTGTTATTTATGCCGGAACTATTGCATCTGCCCTTAACTATGGACTCGTCACATGGTGCAACAAGATCTTGGGGCCAGCTTTAGTTTCCCTTTATAATCCACTTCAACCTGCGTTTTCTGCCCTTCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGTGGATCTTTTATCATTGCGGGTCTATATACGGTTACTTGGGCATCTTATAGAGAAAGACAGGCAACTGTTGGAGTCACTGAACCACTTATTCATGAAAGAAGTGCATACCAGAGAGGTCAAATATTTTCGGAGTCCTCCAGCGTATCACCAAACCCCAAGTCATCAGAAGATTAA 1200 0.43 MLSSQPTNSCISTKLLLPFGSVGGDTRKAHLAMAMVQLLYGGYHVITKVALNVGVNQFVFCVYRDLIALAILAPLAFFYERQTRPPITKQLLLSFFFLGLTGIFGNQLLFLIGLGYTNPTYAAAIQPAIPVFTFLFTVMMGTERVNVLRYEGLAKVGGTLICVCGAILMVLYRGPALIGHAEIVHVAQSEISARGQPEPSGWLISGLQDLGLDHFQLGVMCLIGNCMCMAAFLAIQAPVLKKYPTNLSVTAYSFFFGAVLMVIVSLFVTNESTDWILTQSEILAVIYAGTIASALNYGLVTWCNKILGPALVSLYNPLQPAFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWASYRERQATVGVTEPLIHERSAYQRGQIFSESSSVSPNPKSSED 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00028 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 63 173 - -
Gabi4108g00028 399 Pfam EamA-like transporter family 30 170 IPR000620 GO:0016020
Gabi4108g00028 399 Pfam EamA-like transporter family 217 354 IPR000620 GO:0016020
Gabi4108g00028 399 PANTHER WAT1-RELATED PROTEIN 31 361 IPR030184 GO:0016020|GO:0022857
Gabi4108g00028 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00028 Gabi-Chr4108 296632 301425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00028 112 374 Nodulin-like Gene Family AT5G45370 64.234 1.92e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00028 - - psat:127119930 582.408