Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00027 ATGGCAGCAGCTTCAGGATCAGTGGGGGGTGACACATGGAAGGCCCATTTGGCCATGGCACTGGTGCAACTATTCAATGGCGGCTACCATGTCATCACCAAGGTGGCCCTTAATGTTGGGGTTAACCAATTCGTCTTCTGTGTCTTCAGGGATCTCCTTGCCCTTGCTATCCTTGCACCCCTTGCTTATATCCGTGAAAAACGGACACGACCACCCATTACTAAGAACCTCCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCCATACAGCCAGCCATTCCAGTCTTCACTTTTCTGCTTGCTGTGATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTGGCAAAGGTTGGAGGAACTCTGATATGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGCGGTCCAGCTTTGATAGGATATACAGAAATGGACCTTTTAGTACAAGGTGAAATAAGTGCCAGAGGTCAGCCAGAGCCTTCTGGATGGTTAATCAGTGGTTTACAGGGTATTGGGTTAGACAATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGTATATGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCCGCAAACCTATCTGTCACAGCGTATTCATACTTCTTTGGAGCTTTACTGATGGTGACAGTGTCGTTATTCATGACTAATGAGTCAACTGAATGGAGTTTGACACCGTCAGAAATACTCGCCGTTACTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATTTTGGGGCCAGCTTTAGTTGCCCTTTATAATCCTCTTCAACCTGGGTTTTCTGCCCTCCTTTCCCAAATTTTCCTTGGAAGCCCAATTTACTTGGGAAGTATCATAGGTGGATCTTTTATCATTGCGGGTCTATATACGGTTACTTGGGCATCTTATAGAGAAAGACAGACAAGTGCTGGAGCTACTGTTCATGGCTCTTGGGTCTCTGAACCACTTATTCATGAAAAAGGTGCATTCCAGAGAGGTCACACTTTATCGGGGTCCTCCAGCGTATCCCCTAACGCAAAGCCATCAGATTGA 1176 0.4456 MAAASGSVGGDTWKAHLAMALVQLFNGGYHVITKVALNVGVNQFVFCVFRDLLALAILAPLAYIREKRTRPPITKNLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTLICVSGAILMVLYRGPALIGYTEMDLLVQGEISARGQPEPSGWLISGLQGIGLDNFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANLSVTAYSYFFGALLMVTVSLFMTNESTEWSLTPSEILAVTYAGTIASALNYGLITWCNKILGPALVALYNPLQPGFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWASYRERQTSAGATVHGSWVSEPLIHEKGAFQRGHTLSGSSSVSPNAKPSD 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00027 391 PANTHER WAT1-RELATED PROTEIN 17 347 IPR030184 GO:0016020|GO:0022857
Gabi4108g00027 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Gabi4108g00027 391 Pfam EamA-like transporter family 203 340 IPR000620 GO:0016020
Gabi4108g00027 391 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020
Gabi4108g00027 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00027 Gabi-Chr4108 289247 296076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00027 5 274 Nodulin-like Gene Family AT3G45870 72.593 1.68e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00027 - - gmx:100787738 647.891