Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00026 ATGGCAGCAGCTTCAGGATCAGTGGGGGGTGACACATGGAAGGCCCATTTGGCCATGGCACTGGTGCAACTATTCAATGGCGGCTACCATGTCATCACCAAGGTGGCCCTTAATGTTGGGGTTAACCAATTCGTCTTCTGTGTCTTCAGGGATCTCCTTGCCCTTGCTATCCTTGCACCCCTTGCTTATATCCGTGAAAAACGGACACGACCACCCATTACTAAGAACCTCCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCCATACAGCCAGCCATTCCAGTCTTCACTTTTCTGCTTGCTGTGATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTGGCAAAGGTTGGAGGAACTCTGATATGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGCGGTCCAGCTTTGATAGGATATACAGAAATGGACCTTTTAGGTATTGGGTTAGACAATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGTATATGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCCGCAAACCTATCTGTCACAGCGTATTCATACTTCTTTGGAGCTTTACTGATGGTGACAGTGTCGTTATTCATGACTAATGAGTCAACTGAATGGAGTTTGACACCGTCAGAAATACTCGCCGTTACTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATTTTGGGGCCAGCTTTAGTTGCCCTTTATAATCCTCTTCAACCTGGGTTTTCTGCCCTCCTTTCCCAAATTTTCCTTGGAAGCCCAATTTACTTGGGAAGTATCATAGGTGGATCTTTTATCATTGCGGGTCTATATACGGTTACTTGGGCATCTTATAGAGAAAGACAGACAAGTGCTGGAGCTACTGTTCATGGCTCTTGGGTCTCTGAACCACTTATTCATGAAAAAGGTGCATTCCAGAGAGGTCACACTTTATCGGGGTCCTCCAGCGTATCCCCTAACGCAAAGCCATCAGATTGA 1110 0.4441 MAAASGSVGGDTWKAHLAMALVQLFNGGYHVITKVALNVGVNQFVFCVFRDLLALAILAPLAYIREKRTRPPITKNLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTLICVSGAILMVLYRGPALIGYTEMDLLGIGLDNFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANLSVTAYSYFFGALLMVTVSLFMTNESTEWSLTPSEILAVTYAGTIASALNYGLITWCNKILGPALVALYNPLQPGFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWASYRERQTSAGATVHGSWVSEPLIHEKGAFQRGHTLSGSSSVSPNAKPSD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00026 369 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020
Gabi4108g00026 369 Pfam EamA-like transporter family 181 318 IPR000620 GO:0016020
Gabi4108g00026 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 323 - -
Gabi4108g00026 369 PANTHER WAT1-RELATED PROTEIN 17 325 IPR030184 GO:0016020|GO:0022857
Gabi4108g00026 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00026 Gabi-Chr4108 289247 296076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00026 5 252 Nodulin-like Gene Family AT3G45870 71.429 1.57e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00026 - - gmx:100787738 597.816