Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00025 ATGGCAGCAGCTTCAGGATCAGTGGGGGGTGACACATGGAAGGCCCATTTGGCCATGGCACTGGTGCAACTATTCAATGGCGGCTACCATGTCATCACCAAGGTGGCCCTTAATGTTGGGGTTAACCAATTCGTCTTCTGTGTCTTCAGGGATCTCCTTGCCCTTGCTATCCTTGCACCCCTTGCTTATATCCGTGAAAATACAGAAAGAGTGAACTTACTCAGATATGATGGTCTGGCAAAGGTTGGAGGAACTCTGATATGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGCGGTCCAGCTTTGATAGGATATACAGAAATGGACCTTTTAGTACAAGGTGAAATAAGTGCCAGAGGTCAGCCAGAGCCTTCTGGATGGTTAATCAGTGGTTTACAGGGTATTGGGTTAGACAATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGTATATGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCCGCAAACCTATCTGTCACAGCGTATTCATACTTCTTTGGAGCTTTACTGATGGTGACAGTGTCGTTATTCATGACTAATGAGTCAACTGAATGGAGTTTGACACCGTCAGAAATACTCGCCGTTACTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATTTTGGGGCCAGCTTTAGTTGCCCTTTATAATCCTCTTCAACCTGGGTTTTCTGCCCTCCTTTCCCAAATTTTCCTTGGAAGCCCAATTTACTTGGGAAGTATCATAGGTGGATCTTTTATCATTGCGGGTCTATATACGGTTACTTGGGCATCTTATAGAGAAAGACAGACAAGTGCTGGAGCTACTGTTCATGGCTCTTGGGTCTCTGAACCACTTATTCATGAAAAAGGTGCATTCCAGAGAGGTCACACTTTATCGGGGTCCTCCAGCGTATCCCCTAACGCAAAGCCATCAGATTGA 996 0.4488 MAAASGSVGGDTWKAHLAMALVQLFNGGYHVITKVALNVGVNQFVFCVFRDLLALAILAPLAYIRENTERVNLLRYDGLAKVGGTLICVSGAILMVLYRGPALIGYTEMDLLVQGEISARGQPEPSGWLISGLQGIGLDNFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANLSVTAYSYFFGALLMVTVSLFMTNESTEWSLTPSEILAVTYAGTIASALNYGLITWCNKILGPALVALYNPLQPGFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWASYRERQTSAGATVHGSWVSEPLIHEKGAFQRGHTLSGSSSVSPNAKPSD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00025 331 Pfam EamA-like transporter family 143 280 IPR000620 GO:0016020
Gabi4108g00025 331 SUPERFAMILY Multidrug resistance efflux transporter EmrE 180 285 - -
Gabi4108g00025 331 PANTHER WAT1-RELATED PROTEIN 17 66 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00025 Gabi-Chr4108 289247 296076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00025 68 308 Nodulin-like Gene Family AT5G45370 64.082 1.08e-107 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00025 - - gmx:100787738 452.21