Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4108g00010 ATGTCTTCGTCCAGTTATGCTAGAAGGAGTACCTTCTTTTATCTGATTCTTGCAGTGCTTGTTGCAAAAGCTAGCTTTTGCTTTTCTGCCAAGGTTTATGTAGTGTACATGGGAAGCAAAACTTGCCAAGACTCAGATGATATTCTGAAGCACAACCATCAAATGCTTGCTGCTGTTCACAGTGGAAGTATTGAGCAAGCCCAAGCTTCCCATGTTTATAGCTACAGACATGGTTTCAGAGGCTTTGCAGCCAAGCTGACTGATGATCAGGCTTACCAAATTTCAAAAATGCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACCACTCATTCATGGGACTTCATAGGACTTCTGGACAAAAAAACCATGGAGAATAAAGGGTTCTCCACCAAAAACCAAGAAAATATCATCGTTGGTTTCATTGATACGGGAATTTGGCCTGAATCCCCAAGCTTTAGAGACAGCGACATGCCACCAGTGCCACGCGGATGGAAGGGCCATTGTCAATTAGGAGAAGCATTCAATGCTTCATCTTGCAACAGGAAAGTGATAGGAGCTAGATACTATATGAGTGGATATGAAGCAGAAGAAGGGTCAGACAGAAAAGTCTCTTTCAGATCTCCAAGGGATAGCTCTGGTCATGGGAGCCATACAGCTTCCACAGCAGCAGGACGCTACGTGGCAAACATGAATTATATGGGGCTGGCAGCTGGAGAAGCTAGGGGAGGTGCACCTATGGCTAGGATTGCTGTGTACAAAACATGTTGGGATTCTGGTTGCTATGATGTTGACTTACTAGCTGCCTTTGATGATGCAATAAGAGATGGGGTTCACATTATATCATTGTCTCTGGGTACTGAAGCTCCCCAAGGTGACTATTTCGATGATGCCATATCTGTGGGATCGTTCCATGCTGCTAGTAGAGGAGTGCTGGTGGTAGCATCAGTTGGGAATGAAGGAAGTCCTGGTTCTGCAACTAACCTCGCACCATGGATGATCACTGTTGCTGCTAGCTCAACAGATAGGGATTTCACCTCTGATATAATGTTAGGAAATAGCATTAACATCACGGGTGAAAGTCTGAGTCTCTTGGAAATGAATGCCTCCAGAAGAATAATTTCTGCATCTGAAGCCTTTGCAGGATATTTTACTCCTTACCAATCCAGTTACTGTTTAGATAGTTCCTTAAATAAGACCAAGACCAAAGGGAAGGTTTTGGTGTGTCGACATGCTGAGAGTTCAACTGACTCAAAGTTGGCAAAAAGTAAAGTAGTGAAAGAGGCAGGTGGAGTTGGGATGATACTTATTGATGAGGCAGATCAACATGTTGCCATCCCCTTTGTGATACCTTCAGCTTCTGTTGGAAGAAAAACAGGAGAACGGATTCTATCCTATATCAATAGCACACGTATGCCTATGTCAAGGATTTTCGGAGCCAAGACAGTATTAGGAGTTCAGCCAGCACCCCGTGCAGCAGCATTTTCTTCTAAAGGCCCCAATGCCTTAACCCCAGAAATTTTGAAGCCTGATGTTATGGCTCCCGGATTAAACATCCTCGCAGCATGGTCTCCAGCAGCAGCTGGAAACATGAAGTTCAATATTCTATCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACCTTAGTGAAAGCTGTTCATCCTTCATGGTCTCCATCTGCTATCAAATCAGCAATCATGACAACTGCAACAATTCTGGATAAGAACCACGAACCAATTACAGCAGATCCTGATAGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCCGCAAGAGTTCTTGATCCTGGTCTGGTCTATGATTCACAGCCAGAAGATTTTGTTGCGTTCCTGTGTTCACTTGGTTATGATGAGAGGTCACTCCATCTTGTAACAAGAGACAACAGCACATGTGATGGGGCATTCAAAACACCATCTGACCTCAACTATGCATCTATTACAGTGCCCAATCTGGAAGACAACATTTCAGTAACTCGAGTTGTCACCAATGTTGGACAAGCAAGAAGTATATATGAAGCTGTAGTGTCGTCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAACAGGTTAATCTTCACAAAAATAGGACAGAAAATTAAGTTTTCAGTGAATTTCAAAGTGGTAGCTCCCTCAAAGGGCTATGCATTTGGGTTCTTGTCATGGAGGAACAGAAGATCACAAGTCACTAGTCCTTTAGTTGTACGGGTTGCACCAGCAAGCCTTGGGTTGGTCAGATAA 2289 0.4364 MSSSSYARRSTFFYLILAVLVAKASFCFSAKVYVVYMGSKTCQDSDDILKHNHQMLAAVHSGSIEQAQASHVYSYRHGFRGFAAKLTDDQAYQISKMPGVVSVFPNSKRKLHTTHSWDFIGLLDKKTMENKGFSTKNQENIIVGFIDTGIWPESPSFRDSDMPPVPRGWKGHCQLGEAFNASSCNRKVIGARYYMSGYEAEEGSDRKVSFRSPRDSSGHGSHTASTAAGRYVANMNYMGLAAGEARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGTEAPQGDYFDDAISVGSFHAASRGVLVVASVGNEGSPGSATNLAPWMITVAASSTDRDFTSDIMLGNSINITGESLSLLEMNASRRIISASEAFAGYFTPYQSSYCLDSSLNKTKTKGKVLVCRHAESSTDSKLAKSKVVKEAGGVGMILIDEADQHVAIPFVIPSASVGRKTGERILSYINSTRMPMSRIFGAKTVLGVQPAPRAAAFSSKGPNALTPEILKPDVMAPGLNILAAWSPAAAGNMKFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKNHEPITADPDRRANAFDYGSGFVNPARVLDPGLVYDSQPEDFVAFLCSLGYDERSLHLVTRDNSTCDGAFKTPSDLNYASITVPNLEDNISVTRVVTNVGQARSIYEAVVSSPAGVNVTVVPNRLIFTKIGQKIKFSVNFKVVAPSKGYAFGFLSWRNRRSQVTSPLVVRVAPASLGLVR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4108g00010 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 112 IPR037045 -
Gabi4108g00010 762 Gene3D - 346 488 - -
Gabi4108g00010 762 Gene3D - 628 754 - -
Gabi4108g00010 762 Pfam Fibronectin type-III domain 657 751 IPR041469 -
Gabi4108g00010 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 751 IPR045051 -
Gabi4108g00010 762 FunFam Subtilisin-like protease SBT1.5 140 358 - -
Gabi4108g00010 762 CDD Peptidases_S8_3 110 578 IPR034197 -
Gabi4108g00010 762 ProSiteProfiles Serine proteases, subtilase domain profile. 116 611 - -
Gabi4108g00010 762 MobiDBLite consensus disorder prediction 205 224 - -
Gabi4108g00010 762 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Gabi4108g00010 762 Pfam Subtilase family 139 580 IPR000209 GO:0006508|GO:0008236
Gabi4108g00010 762 Pfam PA domain 384 467 IPR003137 -
Gabi4108g00010 762 Gene3D Peptidase S8/S53 domain 140 624 IPR036852 GO:0004252|GO:0006508
Gabi4108g00010 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Gabi4108g00010 762 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Gabi4108g00010 762 FunFam Subtilisin-like protease SBT1.5 628 754 - -
Gabi4108g00010 762 SUPERFAMILY Subtilisin-like 111 615 IPR036852 GO:0004252|GO:0006508
Gabi4108g00010 762 CDD PA_subtilisin_like 355 481 - -
Gabi4108g00010 762 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Gabi4108g00010 762 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Gabi4108g00010 762 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4108g00010 Gabi-Chr4108 171906 176199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4108g00010 33 753 Subtilisin-like Serine Gene Family AT2G04160 42.952 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4108g00010 - - gmx:100780538 1322.38