Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4104g00001 ATGGCGGAACATGGCATCACAATGTCACTCTCCTCCGACGACGACTCCTCAGACCACGACATACCCCACACAATCACCCCAATAGGAGCAAGCGGCGGTTCCTCCTCTCACCGGAATCCGCCTATCCCCGTCGGGTACCACCTCGCGAATGTCATAACACCGCCGTCAAAGAAACCCCGAGGCAGGCCACCCGGTTCAAAGAACAAGCCAAAGCCACCGCTCGTGATAACCCAAGACAACGAGCAAGCAATGAAAGCGATGATCATCGAGATCCCCGCCGGCGCCGACGTGGTGGAGACGTTGGTCCAGTTCGCCCACCGCCGCCACGTGGGAATAACGATCCTAAGTGCTTCAGGTTCAGTTTCCAATGTTACCCTTTGTCACCCTCTTTCACATTCCCCTGCTTTCACTCTCCATGGACCCTTCACCTTGATGGCTCTCACTGGCACTTATATAAATGCTCCTCCACCACACTCTTGGCCACATTGTTCTTCCTTTGGTATTTACCTCAATGGAAATCAGGGTCAGATCTTCGGTGGAATCATTGCTGGGAAGGTTTTGGCTCACTCTGCTGTTACTTTGGTGGCTTCTGTGTTCAAGAACCCTGAGTTTCACAAGCTTGGTGGTGTCAATGATGGTGGAGATGGTGATAACAACCCTAATGAACAAGGAGGGAATGATGGCATTTCTGGTTTCCATGTTGCAAGTCCCAACCCAATGAATTCCCCTGGTGATGTCAACGCGATGCAAATGCAATGGGGGGGCCATGGTCACCCCTCCAGTCGCCCTGCTAATTACTGA 801 0.5256 MAEHGITMSLSSDDDSSDHDIPHTITPIGASGGSSSHRNPPIPVGYHLANVITPPSKKPRGRPPGSKNKPKPPLVITQDNEQAMKAMIIEIPAGADVVETLVQFAHRRHVGITILSASGSVSNVTLCHPLSHSPAFTLHGPFTLMALTGTYINAPPPHSWPHCSSFGIYLNGNQGQIFGGIIAGKVLAHSAVTLVASVFKNPEFHKLGGVNDGGDGDNNPNEQGGNDGISGFHVASPNPMNSPGDVNAMQMQWGGHGHPSSRPANY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4104g00001 266 ProSiteProfiles PPC domain profile profile. 81 223 IPR005175 -
Gabi4104g00001 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 222 IPR014476 GO:0003680
Gabi4104g00001 266 MobiDBLite consensus disorder prediction 1 74 - -
Gabi4104g00001 266 CDD DUF296 88 199 IPR005175 -
Gabi4104g00001 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 200 IPR005175 -
Gabi4104g00001 266 Gene3D - 84 211 - -
Gabi4104g00001 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 207 - -
Gabi4104g00001 266 MobiDBLite consensus disorder prediction 209 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4104g00001 Gabi-Chr4104 69245 70114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4104g00001 46 207 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 42.373 9.47e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4104g00001 - - zju:107410711 204.527