Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4097g00001 ATGTGTTGTCGCTCATTTGTTTTAGGTGACTTTCTTGCTAAGGAAAAACAAGTGCTGCAATTGGGAGGAGACTGCTCTGTTCTCTCGATCAAGTCCATGGAAGAAGGTTCACCATCAAAGAAACACAAAGGTGAAATTGTTGAGAAGCCAGAATTGCCATTGGAATTTAAAGAAAAGTTTCAAGAAATGGTTGGTCGTCTGTCCATGGAAAAAGGTTCATCGTCAAAGAAAAGCAAAGGTGAAATTGTTGACAATGCTGAATTGCCATGGGCGATTAAAGAGAAGATTCAAGAAATGGGAGGTTCTGAAGTGAAGTTGGTGATTCAGAAATCACTCTTCAAGACTGATCTGTCACCAAATCATGGGCGTTTCTCAATCCCAGTTCAGAAAATGGAAAAGGAAGCAAAGAATTTTGTAAGGGAAAGAGAGGAGTCAATCATGGCAGAACGTCAACAACAAGGACAGAATCAAAGGCTTGCTGGATTGCCAGTGTTTGTAATGGATCCCAGTCTTAAATTTTACAACATGCATTTGAAGAAATGGAAAATGGAGAAAGCTGTGGTTTACAACATCACCAACGGATGGATGGATCTTGTGCGCAGTAACAATCTCAGGGTCAACGACACTGTGCAACTGTGGTCTTTTAGACTCAACGACCAGCAGTTATGTTTTGCTTTTGTCAAGCTTTGA 690 0.4072 MCCRSFVLGDFLAKEKQVLQLGGDCSVLSIKSMEEGSPSKKHKGEIVEKPELPLEFKEKFQEMVGRLSMEKGSSSKKSKGEIVDNAELPWAIKEKIQEMGGSEVKLVIQKSLFKTDLSPNHGRFSIPVQKMEKEAKNFVREREESIMAERQQQGQNQRLAGLPVFVMDPSLKFYNMHLKKWKMEKAVVYNITNGWMDLVRSNNLRVNDTVQLWSFRLNDQQLCFAFVKL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4097g00001 229 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 69 229 IPR005508 GO:0003677
Gabi4097g00001 229 SUPERFAMILY DNA-binding pseudobarrel domain 107 218 IPR015300 -
Gabi4097g00001 229 SMART B3_2 112 228 IPR003340 GO:0003677
Gabi4097g00001 229 Pfam B3 domain-containing protein At2g31720-like 89 200 IPR005508 GO:0003677
Gabi4097g00001 229 CDD B3_DNA 108 218 IPR003340 GO:0003677
Gabi4097g00001 229 Gene3D - 99 228 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4097g00001 87 225 B3 DNA Binding Superfamily AT1G05930 29.286 1.53e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4097g00001 - - gmx:102667627 152.525