Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4093g00005 ATGGATTGTACAGCTGCAAGAAAGACTCAAAAGGCTGATCGAGAAAAATTAAGGAGGGATCGACTTAATGAACAGTTTGTAGAGCTGGGTAACATCCTAGGTGATACAATTCAATTGCTAAAGGATCTTACTTCACAAGTTAGTAAACTCAAAGATGAATATGCTACGCTAAATGAAGAATCTCGTGAGTTGGCTCAGGAGAAAAATGATCTCAGAGAAGAGAAAGCTTCTCTTAAATCAGATATTGAGAACTTGAATAATCAGTATCAGCAGCAAATCAGAACTATGTATCCTTGGACTGCAATGGATCATTCAGTTATGATGGCTCCACCATCATATCCGTATCCAGTGCCAATGCCAGTACCTCCTGGTCCGATTCCCATGCAGCCATACCCCTACTATGCTAATCAACATCCTGCAGTCATCCCTAACCCATGTTCAACATTTGTTCCTTATTTAGCCCCCAATACCCTTGTTGAACAGCAATCCACCCAGTATGTATCCCCACCACTTCATCCGGGTAGTCGGTCCCAGTCCCATGTGTCAGGGAAACAAGACTCCAAAAACAAATCATCCAGGGAGAGCAAGGCTGGAAAAAGTGAGGATTCTAATGATGTCACTACAGACCTCGAGTTGAAGACTCCTGGGTCTTCTGCAGATCAGGATTTATCATCCGGACAAAGAAAATCTAGCAAGTTGTCAAGGAAGGAAAGCATTTGCACAGAAGGGAGTTCGTTTGGTAGGTGTTCTTCATCTCAAAGCGTTCAGGATAGCTCATCAAGTAGTGTAGCTGCCAGCAGAAAGCCTAATGAATGA 816 0.4301 MDCTAARKTQKADREKLRRDRLNEQFVELGNILGDTIQLLKDLTSQVSKLKDEYATLNEESRELAQEKNDLREEKASLKSDIENLNNQYQQQIRTMYPWTAMDHSVMMAPPSYPYPVPMPVPPGPIPMQPYPYYANQHPAVIPNPCSTFVPYLAPNTLVEQQSTQYVSPPLHPGSRSQSHVSGKQDSKNKSSRESKAGKSEDSNDVTTDLELKTPGSSADQDLSSGQRKSSKLSRKESICTEGSSFGRCSSSQSVQDSSSSSVAASRKPNE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4093g00005 271 Coils Coil 33 95 - -
Gabi4093g00005 271 MobiDBLite consensus disorder prediction 237 271 - -
Gabi4093g00005 271 MobiDBLite consensus disorder prediction 163 271 - -
Gabi4093g00005 271 PANTHER TRANSCRIPTION FACTOR BHLH121 2 269 IPR044579 GO:0003700|GO:0006879
Gabi4093g00005 271 MobiDBLite consensus disorder prediction 163 185 - -
Gabi4093g00005 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 62 IPR036638 GO:0046983
Gabi4093g00005 271 Coils Coil 5 25 - -
Gabi4093g00005 271 MobiDBLite consensus disorder prediction 186 208 - -
Gabi4093g00005 271 MobiDBLite consensus disorder prediction 209 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4093g00005 Gabi-Chr4093 43730 45934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4093g00005 1 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.480 9.70e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4093g00005 - - gmx:100804250 411.379