Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4090g00002 ATGGCATCAAATCAAACACCCCTTAACCAAGCAAAACTTGACCTTCCAAATAATGACCTTGAGCAACAAGCAACAACTCTAGAGATTGAAACCAAGGACTTTGACTACTCAAAAAGATCTCAATGGCTACGTGCTGCTGTTTTGGGAGCCAATGATGGGTTGGTCTCAACAGCATCTCTAATGATGGGTGTTGGAGCAGTCAAACAAGACATTAAGGCCATGATACTATCAGGGTTTGCAGGGTTGGTAGCAGGGGCTTGTAGCATGGCCATAGGTGAGTTTGTATCTGTGTACTCACAGTTGGACATAGAGGTTGCTCAAAGAAAAAGAGATAAGGAAAGGAGAGGAAGAGAACAAGAAGATGCTGAAGAGAATGAAAATTTGCCAAACCCTTTACAAGCAGCAGCAGCATCAGCTTTAGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCATCTTTTGTAAGGGAATATAAGGTGAGACTTGGAGTGGTTGTGGCTGCAGTGAGCTTTGCTTTGGTGGTCTTTGGTTGGTTAGGTGCAGTGCTTGGTAAGGCACCAGTTTTGAGGTCTTCTTTAAGGGTCTTGCTTGGGGGTTTGGTGGCTATGGCTATTACTTTTGGGCTAACCAAGTTGCTTGGGTCAAGTGGACTTTAG 660 0.447 MASNQTPLNQAKLDLPNNDLEQQATTLEIETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQRKRDKERRGREQEDAEENENLPNPLQAAAASALAFSVGAMVPLLAASFVREYKVRLGVVVAAVSFALVVFGWLGAVLGKAPVLRSSLRVLLGGLVAMAITFGLTKLLGSSGL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4090g00002 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 20 214 IPR008217 GO:0005384|GO:0030026
Gabi4090g00002 219 Pfam VIT family 120 211 IPR008217 GO:0005384|GO:0030026
Gabi4090g00002 219 Pfam VIT family 43 124 IPR008217 GO:0005384|GO:0030026
Gabi4090g00002 219 MobiDBLite consensus disorder prediction 109 124 - -
Gabi4090g00002 219 CDD Nodulin-21 41 188 - -
Gabi4090g00002 219 MobiDBLite consensus disorder prediction 109 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4090g00002 Gabi-Chr4090 12718 13413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4090g00002 1 219 Nodulin-like Gene Family AT3G43660 67.580 1.27e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4090g00002 K22736 - pop:7466401 311.997