Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4089g00002 ATGTCAGCAACTGCATACGACACTGATGATGTCTCTGTTTCTTTAACCAAGAAGAGGAAGATTTATGAAGAAACTCATGTTGCTGCAAGAAAGAAGATCAAGAAAGTCCTTAATGGCAGTGATCTTGGCAACATGAGGAGGCTCTTGCTCCCTAAAGATTTTGCTGAGAATTTGGTGGTGCCGGTGTTGGATGGAGACGTTGAAAGAGGTGTTCAAGTTGACATTTGGGATGTAGACACTGCCTCCATTCATTCTTTAATTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGAAATTGGGTTAAAGATTTTGTATCAAGGAGAGGCTTAAAGAAAGGGGATGAGATTGGCCTTCGATCCATACAAAAATCGCTTTAA 387 0.3979 MSATAYDTDDVSVSLTKKRKIYEETHVAARKKIKKVLNGSDLGNMRRLLLPKDFAENLVVPVLDGDVERGVQVDIWDVDTASIHSLIFKKWVSSRSYVFIGNWVKDFVSRRGLKKGDEIGLRSIQKSL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4089g00002 128 Gene3D - 24 128 IPR015300 -
Gabi4089g00002 128 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 17 122 - -
Gabi4089g00002 128 CDD B3_DNA 31 127 IPR003340 GO:0003677
Gabi4089g00002 128 SUPERFAMILY DNA-binding pseudobarrel domain 33 126 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4089g00002 Gabi-Chr4089 32840 33324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4089g00002 33 123 B3 DNA Binding Superfamily AT3G24650 31.868 2.25e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4089g00002 - - gmx:102663812 136.346