Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4089g00001 ATGTCAGCAACTGCATACGACACTGATGATGTCTCTGTTTCTTTAACCAAGAAGAGGAAGATTTATGAAGAAACTCATGTTGCTGCAAGAAAGAAGGTGTGTGTAGAGAGAAGTTGGGGTTACTCTTTGGATTTGATGCTTTATGATGACCCTTGGAAGATCAAGAAAGTCCTTAATGGCAGTGATCTTGGCAACATGAGGAGGCTCTTGCTCCCTAAAGATTTTGCTGAGAATTTGGTGGTGCCGGTGTTGGATGGAGACGTTGAAAGAGGTGTTCAAGTTGACATTTGGGATGTAGACACTGCCTCCATTCATTCTTTAATTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGAAATTGGGTTAAAGATTTTGTATCAAGGAGAGGCTTAAAGAAAGGGGATGAGATTGGCCTTCATTGGGATCCATACAAAAATCGCTTTAATTTTTCTGTTCTTGATGCCTTTTAG 480 0.3979 MSATAYDTDDVSVSLTKKRKIYEETHVAARKKVCVERSWGYSLDLMLYDDPWKIKKVLNGSDLGNMRRLLLPKDFAENLVVPVLDGDVERGVQVDIWDVDTASIHSLIFKKWVSSRSYVFIGNWVKDFVSRRGLKKGDEIGLHWDPYKNRFNFSVLDAF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4089g00001 159 SUPERFAMILY DNA-binding pseudobarrel domain 50 153 IPR015300 -
Gabi4089g00001 159 CDD B3_DNA 52 157 IPR003340 GO:0003677
Gabi4089g00001 159 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 30 157 - -
Gabi4089g00001 159 Gene3D - 51 155 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4089g00001 Gabi-Chr4089 3086 3565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4089g00001 50 151 B3 DNA Binding Superfamily AT3G26790 30.189 1.34e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4089g00001 - - lang:109331497 187.963