Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00097 ATGGTTATTCAAAGTAATCATGATGTAACTTCTGAGGGGATTCTTGAGAATGTATGGGCTAAGGTTATAGCAGATGGAAGAACAGGCGATGCAGCAGAATCTTCTAACTCCTGGGAAGAACTGCCTAATCTTGATGGAAGAGATGGGTCTATGGAAATGCTGCAAAGACTTCCAAGTTTAGGGAGATGGATATCAATGGGAGCTGATTTCTGGGAACAAGTTTTGGATGGTGTTCTACCTGCTGAAAGCAAAATAGAAGAATCTAGCAACAAAAATTTGGAAATTGAAAGTGCTAATAAACCCAATAAAAAAGTAGAAGATGCTGTGAGAAAAGAGAAGGCATTTGCAAAACACTATAGGGGAGTAAGGAGAAGGCCATGGGGTAAATATGCTGCAGAGATTAGAGACTCATCCAAGAAAGGTGCTAGAGTTTGGCTTGGGACATTTGATACAGCTGAAGAAGCAGCTTTAGCTTATGACAAAGCTGCTTTGAGAATTAGAGGTCCAAAGGCACACCTCAATTTCCCACTTGAGACAGTCACAAATGCTGTAGGATGTGGAAATAAAGGAACTCATCTTACTATCTCGGCTTCTTCTAGAACTTGTGAAGAGTATTGCTCTGCTTGCACATGCACTGTGGACAAAGAAAATGTTTTCAAATCCAGGAAGAGAGGATCACGGGATGGGGAAGAATTTGCTGCTGATATGATGAATAAACAACATGCAACAAAAAAGATGGCAAGCTTGGAACACATGCTAGAAAATGAACTAGATGTTTTTGTATTTCAGGACCTAGGAAGTGATTATTTGGACAGTTTGCTGTCTTCTTTTTGA 834 0.4005 MVIQSNHDVTSEGILENVWAKVIADGRTGDAAESSNSWEELPNLDGRDGSMEMLQRLPSLGRWISMGADFWEQVLDGVLPAESKIEESSNKNLEIESANKPNKKVEDAVRKEKAFAKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKAHLNFPLETVTNAVGCGNKGTHLTISASSRTCEEYCSACTCTVDKENVFKSRKRGSRDGEEFAADMMNKQHATKKMASLEHMLENELDVFVFQDLGSDYLDSLLSSF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00097 277 PRINTS Ethylene responsive element binding protein signature 142 158 IPR001471 GO:0003700|GO:0006355
Gabi4083g00097 277 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Gabi4083g00097 277 PANTHER DNA-BINDING DOMAIN 91 266 IPR044808 GO:0003700|GO:0009873
Gabi4083g00097 277 Gene3D AP2/ERF domain 117 178 IPR036955 GO:0003700|GO:0006355
Gabi4083g00097 277 Pfam AP2 domain 118 168 IPR001471 GO:0003700|GO:0006355
Gabi4083g00097 277 SMART rav1_2 118 182 IPR001471 GO:0003700|GO:0006355
Gabi4083g00097 277 SUPERFAMILY DNA-binding domain 118 178 IPR016177 GO:0003677
Gabi4083g00097 277 CDD AP2 117 176 IPR001471 GO:0003700|GO:0006355
Gabi4083g00097 277 ProSiteProfiles AP2/ERF domain profile. 118 176 IPR001471 GO:0003700|GO:0006355
Gabi4083g00097 277 FunFam Ethylene-responsive transcription factor 2 117 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00097 Gabi-Chr4083 729395 730228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00097 14 277 AP2-EREBP Transcription Factor Family AT4G18450 37.987 2.56e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi4083g00097 AP2 3.2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00097 - - gmx:100820226 343.199