Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00096 ATATCTTCAAAACCAACACGCCACCAAAACAGAGAGAGAGAGAGAGAGACCCTGACACGAAAACAGGGGAAGCAAGAAAAAAGAAGAAGAAAGATTGAAGCCATGGTTTTATTCTCCCAAACCCAAACAGAGTTACCCTTAAATGAGAATGACTCACAGGACATGGTGATATACCAAGTTCTGAACGAGGCTAATGCTATGAGCAACCCTTTTATGCCTCAGAGGCACCAAACCCTCGGTGGCCAGCAGCACGGCCTAGAAGCCACGAGGAGCATAGCAAAGAAGCACTACAGAGGGGTGAGGCGCCGCCCATGGGGGAAGTACGCGGCGGAGATTCGTGACTCGGCACGGCATGGAGCAAGGATATGGCTTGGCACCTTTCAAACAGCTGAAGAGGCTGCCATGGCATATGACAGAGCAGCTTTCAAGATGAGGGGTTCCAAGGCTTTGCTTAATTTTCCACCTGATGTTGTTGCTGCAGCTTCCTTGCAGATGGAGTTTTCTTCTAAGCATGATTTGAATAATCACGATTCTGATTCAAGTGCTAGCAGTTCTTGCACAAATTCCACTGGGGTAATAGATAGCTAG 588 0.4796 ISSKPTRHQNRERERETLTRKQGKQEKRRRKIEAMVLFSQTQTELPLNENDSQDMVIYQVLNEANAMSNPFMPQRHQTLGGQQHGLEATRSIAKKHYRGVRRRPWGKYAAEIRDSARHGARIWLGTFQTAEEAAMAYDRAAFKMRGSKALLNFPPDVVAAASLQMEFSSKHDLNNHDSDSSASSSCTNSTGVIDS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00096 195 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Gabi4083g00096 195 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
Gabi4083g00096 195 Gene3D AP2/ERF domain 95 155 IPR036955 GO:0003700|GO:0006355
Gabi4083g00096 195 CDD AP2 95 156 IPR001471 GO:0003700|GO:0006355
Gabi4083g00096 195 MobiDBLite consensus disorder prediction 178 195 - -
Gabi4083g00096 195 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Gabi4083g00096 195 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Gabi4083g00096 195 PANTHER DNA-BINDING DOMAIN 44 177 IPR044808 GO:0003700|GO:0009873
Gabi4083g00096 195 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Gabi4083g00096 195 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Gabi4083g00096 195 MobiDBLite consensus disorder prediction 1 30 - -
Gabi4083g00096 195 MobiDBLite consensus disorder prediction 172 195 - -
Gabi4083g00096 195 FunFam Ethylene-responsive transcription factor 2 95 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00096 Gabi-Chr4083 715632 716429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00096 37 154 AP2-EREBP Transcription Factor Family AT4G17500 47.552 1.77e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gabi4083g00096 AP2 4.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00096 K13433 - gmx:100811533 200.675