LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi4083g00076	ATGCTGCACTTCTTGAGGAGCAAGTCCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCCTCTCCTGCTTCTTCTTTGCAGCAAGTTATTGCAGCTCTGTGAGGAGGAAGATGATGCCACTAGCCCATTAGCTGTGCCTAAGCCTGAACCTAATGATCAAGCTGGGGCTAAGGAGATATTCCAAGAGGGCCAACATCAAAATGATTTCCTATTAATTGATGAGAGTAAACACTCCACCTCAGGAGTTTCCAATATGGCCGCTAACAACTTGGATGGGCCTGCTTTAGAGTATCATCAATTTGATTTAAATCAGGACTTGGATCACAGCTTTTATGCTGGTTTTAACGATACAGGTTTTTGTGAGGAGGATGCTGTTCCTCATATATCTAGCTATCTACCAAGCATCTTCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGTGCAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTAAATGAAGGACCACCAGGCATGGCCCCAGTTCTAAGACCTGGGGGAATTGGACTGAAGGATAATTTACTTTTTGCTACTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATACCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATTAGGGAATGGCTTTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGCGGAAACAGAAAGCAGAGGTCATTGCCTGATTATAGTGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGGGGCCTGAAGAGGTCCTATTATATGGACCCACAACCGCTGAACCATTTTGAGTGGCACCTTTATGAGTACGAAATCAGCAAGTGTGATGCATGTGCCTTATATCGGTTGGAACTAAAGCTTGTTGATGGGAAGAAGAACTCTAAGGCAAAGATAACTAGTGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCAGAGTTTCCGTCTGATAACAGATGGTCTGCCAGAGGAAGAACCAAACCTAATGCCAAGGTTGGCATAGGTGGTGTCTATTCAACTTCAAACAAAGTAACTCAACTAAATGGACCATATGAATACGGGTTAGCTACACCATATGACTATCTTGTTGAGAACACAAGCGACTATTATTTGACGTGA	1251	0.4476	MLHFLRSKSIRCFVSGRLSSMSPLLLLLCSKLLQLCEEEDDATSPLAVPKPEPNDQAGAKEIFQEGQHQNDFLLIDESKHSTSGVSNMAANNLDGPALEYHQFDLNQDLDHSFYAGFNDTGFCEEDAVPHISSYLPSIFPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFATLSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKITSDSVADLQKQMGRLSAEFPSDNRWSARGRTKPNAKVGIGGVYSTSNKVTQLNGPYEYGLATPYDYLVENTSDYYLT	416

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi4083g00076	416	PANTHER	TRANSCRIPTION FACTOR VOZ1	29	411	IPR039277	GO:0006355\|GO:0048578

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi4083g00076	Gabi-Chr4083	622907	626302	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi4083g00076	31	415	VOZ-9 Transcription Factor Family	AT1G28520	67.241	0.0	529

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Gabi4083g00076		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi4083g00076	-		-	gmx:100798565	705.671