Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00074 ATGGATATCAACCAAGGGCATGGAGCTGAAGAGTTGTTTCAGGCTCAGTCCCATTTGTATAGATATACCTACAGTTTCATTGGTTCAATGTGCCTCAAAAGTGCAGTTCATTTGGGAATACCTGACATAATCCACAACCATGGCCAACCCATTACTATCCCTGAATTGGTCTTGGCACTTCACATCGACCCTTCCAAATCTGGTTATGTATATAGGCTTATGCGCTTGCTGGTGCATGCTGGCTTCTTTGCTACAACCAAGGTTGCAAAAGATGATGATGATGAGAAGGAAGAAGTGGGGTATGATCTCACACCTTCCTCAAGGCTTCTCCTCAAAGACAGTGTCCCAACCTTGTCTCCTTTTGTAAGGGCAATGTTTCATCCGTCTCTAGTTCACTCATCAGAGTTCTTGGGAGAGTGGTTTCACACAAATGAGCTCACACCCTTTCACACTGCATATGGCACCAGTTTTTGGGACTATTTAAGCCAAAACCAAGACTTTAACATGCTCTTCAATGAAGCCATGGTTAGTGATTCCGGGATGATGAATTTGGTAATCAAAGATTGCAAATCTGTTTTTGAGGGATTGAACTCATTGGTTGATGTGGGTGGTGGTACAGGAGCAGTAGCTAGGATGGTTTCTGAGTCATTTCCTAATTTTCATTGCACAGTGTTAGAGCTTCCACATGTGGTTGAAAATTTGCCAGATAGCAGCAATTTGAAGTTTGTTGGAGGTGACATGTTTCAGTCTATTCCTTCAGCAGATGCCATTCTTCTTAAGTTAGTCTTGCATGCTTATAGTGATGAGGACTGCATTAAGGTACTAAAGAAGTGCAGAGAAGCTATTTCAAGCAAAGACAAAGAAGGAAAAGTAATTATCATAGACATAGTGATCAGGGAGAAGAATGATGAGCACGAATTAAAAGAAGCAAAACTCTTTTTTGATGTGTTAATGATGGTTGTGGTCAATGGAAGAGAAAGAGAAGAAAAAGAATGGGAGAAGCTCTTCTTGGAAGCTGGATTCAGTCACTACAAGATCACACCCATCTTTGGGATGAGGTCACTTATTGAAGTTTATCCTTGA 1083 0.4127 MDINQGHGAEELFQAQSHLYRYTYSFIGSMCLKSAVHLGIPDIIHNHGQPITIPELVLALHIDPSKSGYVYRLMRLLVHAGFFATTKVAKDDDDEKEEVGYDLTPSSRLLLKDSVPTLSPFVRAMFHPSLVHSSEFLGEWFHTNELTPFHTAYGTSFWDYLSQNQDFNMLFNEAMVSDSGMMNLVIKDCKSVFEGLNSLVDVGGGTGAVARMVSESFPNFHCTVLELPHVVENLPDSSNLKFVGGDMFQSIPSADAILLKLVLHAYSDEDCIKVLKKCREAISSKDKEGKVIIIDIVIREKNDEHELKEAKLFFDVLMMVVVNGREREEKEWEKLFLEAGFSHYKITPIFGMRSLIEVYP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00074 360 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gabi4083g00074 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 360 IPR016461 GO:0008168
Gabi4083g00074 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Gabi4083g00074 360 FunFam Coniferyl alcohol 9-O-methyltransferase 2 110 - -
Gabi4083g00074 360 SUPERFAMILY "Winged helix" DNA-binding domain 10 113 IPR036390 -
Gabi4083g00074 360 Gene3D - 5 110 IPR036388 -
Gabi4083g00074 360 Gene3D Vaccinia Virus protein VP39 112 360 IPR029063 -
Gabi4083g00074 360 CDD AdoMet_MTases 199 298 - -
Gabi4083g00074 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 359 IPR029063 -
Gabi4083g00074 360 Pfam O-methyltransferase domain 138 342 IPR001077 GO:0008171
Gabi4083g00074 360 FunFam O-methyltransferase ZRP4 112 360 - -
Gabi4083g00074 360 PANTHER O-METHYLTRANSFERASE 11 345 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00074 Gabi-Chr4083 607075 608524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00074 30 358 Monolignol Biosynthesis Gene Families AT5G54160 33.626 2.24e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00074 K22588 - qsa:O6P43_012698 525.013