Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00068 ATGACATGGTGCAATGACTCTGATGAGGAGAAGGGCATTGAATCAGTCAGGCCCACTATTACTCCTAGAACTACTAATAACACCGAAGAAATTCGAACCATAACATGCCCCTCATGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATTCATGACTTGCCGGGGTTACCAGCAGGAGTGAAATTTGATCCGAATGATCAAGAAATACTAGAACATTTGGAAGCCAAGGTGGCGTCTGATGTGTGCAAGCTTCATCCCCTTATTGATGAGTTCATACCAACGCTTGAAGGCGAGAATGGAATCTGTTATACACACCCAGAAAAGCTACCAGGAGTAAGCAATGATGGACAGATCCGCCACTTCTTTCATAAGCCTTCTAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACGGGCAAAACTAGACCAGTTTTTGCTGGTGGTGCAGTGAAGGGTTTTAAAAAGATATTAGTACTCTACACCAACTATGGCAGGCAAAAGAAACCTGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGCAGTAATGAAGAAGAAAAAGATGGAGAATTAGTGGTTTCAAAGGTCTTCTACCAGACACAACCTAGACAATGTGGTAATTCCATTATAAAGGATCCATACGAAAGAATATTGAATGACCGAAGTAGCCACAATGAAAGTACAATACCTAATAATACAGCACTTGTGGATTACTACAGTACTGCTCCTTATATAAATTATGACCATGTCCATGTTCATGTTGATACTAACAGTGAAAGCTCCCCACAACTTATTTCAAACTTAATTGTCCAAGGTGATGGCTCTTACATTCGCGTAGCAATGGATGCAAATAAAGCAAGAAGACTGGACAGAAAGTAA 930 0.4065 MTWCNDSDEEKGIESVRPTITPRTTNNTEEIRTITCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVASDVCKLHPLIDEFIPTLEGENGICYTHPEKLPGVSNDGQIRHFFHKPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSIIKDPYERILNDRSSHNESTIPNNTALVDYYSTAPYINYDHVHVHVDTNSESSPQLISNLIVQGDGSYIRVAMDANKARRLDRK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00068 309 SUPERFAMILY NAC domain 51 216 IPR036093 GO:0003677|GO:0006355
Gabi4083g00068 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 22 269 IPR044799 GO:0003700
Gabi4083g00068 309 FunFam NAC domain-containing protein 73 66 220 - -
Gabi4083g00068 309 MobiDBLite consensus disorder prediction 136 152 - -
Gabi4083g00068 309 ProSiteProfiles NAC domain profile. 57 216 IPR003441 GO:0003677|GO:0006355
Gabi4083g00068 309 MobiDBLite consensus disorder prediction 133 152 - -
Gabi4083g00068 309 MobiDBLite consensus disorder prediction 1 23 - -
Gabi4083g00068 309 Pfam No apical meristem (NAM) protein 58 197 IPR003441 GO:0003677|GO:0006355
Gabi4083g00068 309 Gene3D NAC domain 66 220 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00068 Gabi-Chr4083 505519 509368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00068 1 226 NAC Transcription Factor Family AT4G28500 72.727 2.17e-124 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4083g00068 NAM 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00068 - - gmx:100809389 493.426