Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00067 ATGAACCAAGCCGAAAATATTGCTTATGATTTGGTCATGGTCACTCTATCCATATCTCTCATCGTTCTCGGTGTTATACTCTTTCTTGCTTGCAAGAAGAAACCGGTTAAGTCAGAGGAAACACTTCCTGTAAAGCTTTGTGCTCGTGCATACCCGTTGATGGAAATTGATGCTGCTACTGATGGCTTCAATCATAGGAGAATCGTTGGTCAGGGTCGCTTAGGAACTGTGTATGCAGGGACACTTGAGCAAGTAGAACTTGTAGCTGTCAAGCGGATTCATCCAGTTCTTGTGTTGAGCAATGCAGGATTTGGGTTCTCATCCGTGTTAAAATGGCTCTCTTTAGCTCATCACCCAAACGTAGTTCCAATTATAGGATTCTCAGAAGCACCGGGTGAAAGAGTTATACTAATGGAGTTTGTGCGCATGGCAAGCCTACAATTTTACTTGCATCAAAACCCAGATGGGGTTTCACTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGTAGCTAGAGGGCTTCAATACCTGCATGAAGTGGTAGCACCAAACATTGTACATGGGTGTGTTAAGTCCTCTAATATTCTTATTGATGTCAACTTCTGTGCTAGGATTTCTGATTATGGCCTTAACTTTTTGGCACCATTAGAAAAAAGAGGGCTAGTAGGTTATGTAGATGATGAGTATTGGAATGAAAGAGGGGGTGGAGCTACCAAGGAAAGTGATATCTATGGGTTAGGGGTGGTCCTATTGGAGCTTTTAAGTGGAAGAGGATGTGAGGGAGGGTTGTTGTCAAAGTGGGCATTGCCTTTGATAAAGGAAATGAGTTATAGTGAACTTTTGGATCCTAGGCTTGTGATTCCTTCTGACATGAAGCCTCTGATTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGAAATGTAGGCCTTGTGTGGCTCAAGTAGTAACCATTTTGAACAACTTAGAGACGCAAGTGTGCCTCTGA 1002 0.4281 MNQAENIAYDLVMVTLSISLIVLGVILFLACKKKPVKSEETLPVKLCARAYPLMEIDAATDGFNHRRIVGQGRLGTVYAGTLEQVELVAVKRIHPVLVLSNAGFGFSSVLKWLSLAHHPNVVPIIGFSEAPGERVILMEFVRMASLQFYLHQNPDGVSLLDWNKRFRIAAGVARGLQYLHEVVAPNIVHGCVKSSNILIDVNFCARISDYGLNFLAPLEKRGLVGYVDDEYWNERGGGATKESDIYGLGVVLLELLSGRGCEGGLLSKWALPLIKEMSYSELLDPRLVIPSDMKPLIRLAKVASACVGNSRKCRPCVAQVVTILNNLETQVCL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00067 333 SUPERFAMILY Protein kinase-like (PK-like) 40 324 IPR011009 -
Gabi4083g00067 333 FunFam Receptor protein kinase CRINKLY4 142 331 - -
Gabi4083g00067 333 Pfam Protein tyrosine and serine/threonine kinase 66 323 IPR001245 GO:0004672|GO:0006468
Gabi4083g00067 333 PIRSF ILK 25 332 - -
Gabi4083g00067 333 PANTHER OS01G0253100 PROTEIN 46 328 - -
Gabi4083g00067 333 Gene3D Transferase(Phosphotransferase) domain 1 142 332 - -
Gabi4083g00067 333 ProSiteProfiles Protein kinase domain profile. 63 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4083g00067 333 FunFam serine/threonine-protein kinase-like protein ACR4 30 140 - -
Gabi4083g00067 333 Gene3D Phosphorylase Kinase; domain 1 28 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00067 Gabi-Chr4083 494438 496053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00067 48 331 Receptor kinase-like Gene Family AT3G59420 38.591 5.70e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi4083g00067 PK_Tyr_Ser-Thr 7.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00067 - - vun:114187437 592.423