Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00058 ATGGAGGCTGAGGCTGCTTCGGAGGCAGAAAACAATACACAGAAGAGGGACGATGCAGGTGATAACAGCAATGACAATAACAACAATGGAAGCAGTAGCAGAATCGTGAATTCCAATGAGGGTCAGAGTAAGCCCAAGCGCCAGATGAAGACCCCCTTTCAGCTTGAAACGCTCGAGAAAGCTTATGCTTTGGAGACGTATCCATCGGAGACGATGAGGGCGGAGCTGTCGGAGAAGCTGGGATTGTCGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGCGGTTGAAGGACAAGAAGGACTCGTCTTCGAAGAAGCCGGTGGTGCCGGCACCACCTTTGCCGGATTCTCCAACTGATGACCCGAGGTTGGGTCATGAACCTGGTAATGATTACGGATCCGGGTCGGGTTCGGGTTCCAGCCCGTTTACCCGTTCGGAGTTGCGGAATGTGATGCCCGGCCGGGGCGTGCCGGGGTACTATGAGTCACCGCAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGTGAGCCTTTGAGGGAAGATGGACCCATTCTTGGAGTTGAGTTTGATTCATTGCCACCGGATGCGTTCGGGGCACCCATAGCTGTTACAGAACAGCAGAAGAGGCCCAGTCTTGCCTACGACAGTAAAGTATATGAAAGACATGATGCGAGAACAAATAAGGCAATGGCAAGGACATTTCCCGAATATCCATTTCTTCCAAACCAGTCTGGCATTAGATCGGATGCTTTTGGACAATTGAGCCAACCACATTTACATGATCCAATGGAGGGTCCTACCAGAACTCCTTCTTTTCCCCTTGGAATTGAACAGCTACCCAGAATTCATGCTACCCCAAGTCATTCTTCTCGTGTTCGCCTTTTGTCTCAACAGGACAAACAAGCGATTCTCTATCCATCTCCTCATCGAGAGAATGATGTTTCTCCCCAAAGGGAATCTTATACAAACATAGCCAATACTGGAATGAACTCCCACTTTACTGATCATCCAATTGTTGGACAAGAAAATCCTTATGTTTTACCTGGTGGACAAGTTTTTCATAATGATGCAGTATTGCCAGTATTGCGGATGGAGAAGAAACGAAAGAGTGATGATGCCAGAGTTGCCAGGGAAGTTGAAGCCTATGACATAAAGATTCGGAAAGAGCTTGAGAAACAAGATAACCTTAGACGAAAGAATGAAGAGCGATTGAGGAAAGAAATGGAAAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAGCGGTTGATGCGTGAGAGACAGCGGGAAGAGGAAAGATCTAAGCGTGAGCAAAGACGGGAAATAGAACGAAGGGAAAAGTTTTTGCTGAAAGAACATTTAAGGGCTGAGAAAAAGAGGCAAAAAGAAGAGCTTCGCAAAGAAAAAGAGTCAGAGAGAAGGAAAGCTGCGCTTGAAAAGGCAACTGCTCGTAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGACTTTCCTCTATTATACATATTGATCTTGATACTTTGCAGAACCTTGAATCATTTAGGGATTCATTGTGTGTTTTCCCACCCAAGAGTGTAAAGCTGAGAAAGCCATTTGCTATCCAACCCTGGATCAACTCAGAACAGAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGAGTTATGGCCTTTTACTCTTGATGAGTTTGTACAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTCTTCTTAAAGTTATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAAAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAGATTGTGGAAGGAGCATATGCATGGGGCTTTGATATTCGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCAGAAGTTTACCGACAGTTAGCACTGTCTGCAGGATTTGGACCGCAGCTAAAGAAAAGAAGTATTGCATGGTCATATCCAAATGATAAAGACAAGGGAAGAAGTTGTGAAGATATCATTTCTACACTTCGTAATGGTTCAGCAGCTGAAAGTGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCTCCTCGAAGATCAAGGCACCGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTCCACGTTCTCTCACTAGAAGGTAGCAAGGGCTTGACAGTAATAGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACGACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCATCGACATATCGTGTGCGGGCTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATTCTCTCTGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGATTTGTAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGGAGTCAGAAAGTGATGAAGTTGATGAAGATCCTGAAGATGATGATTTACTAAATCCTTCAACTGCAAACCAAAATTTGGAACAGTACGATGGTACAAACATTTGTTCATCAAATATGAAAGAAGATTTGGGTCATGATGTAGACCTTATTCAAAACGAGTTTGATACGGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCTGATTGTCCCAGTTCTGTCACTGGACAACCTGTTGCATGTGAAGGTTTAAATACTGGAAATCTTGAAGAAGATAATATGGAAATTGATGAAAGTAAGTCTGGAGAGTCCTGGGTTCAAGGGCTTGCTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCATCAAATGCTTTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGTCTGAAAGATGATAATATTAATAAATCAGATTTTCCATCACTTATTGGAAATAAAGTTGAAACACAATTCACTTATCCTGCTGTGGAGGGCAACCAAAGTCCATTGCTTGATATTAATATTAACAGTATCGATAATGAAGCATCACCCAGCACTGCAGAAAACCAAAGAGATGCTCCTGCTGCACAGAGCCTACCTTTCGAAAAGTCCTCATTAATTCAAGATTTATGCGCTGGCACAGGTCCAGACAATGCTCAGACTCAGGTACCTGCACAATATTCAAAAAGGTCACGTTCCCAATTAAAATCTTATGTTGCCCACCTAGCAGAGGAGATGTATGTCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTGTGTTGCATCTGCTTCTAGCAATGATCCTGGTTCTGGCAGGATCTTTGTTGAATATCATGATGGCAAATGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGTTCTTTTGACATCATTGGATTCACGTGGGATCAGGGAATCTCATTTGCGCTTGATGTTGCAAAAGATTGAGAATTCCTTTAAAGAAAATGTTCGGAAGAATACACAATGTGCCAAAATCGGAAGCAGAGGCAAAGTTTCTATTAAAAATGAAGCTAATGAAACATATCCCTTCCCTGATCGCAATGCTGGGTCTGACAGTCCTAGCAGTACCCTTCATGGCTTGAACTCTGATTCATCAGAAACTTCATCATCTTTCAAAATCGAGCTTGGAAAAAGCGAGGTCGAGAAAAAAGATGCCTTGAGAAGGTATCAAGAATTTCAAAAGTGGATGCGGAAAGAATGCTATAATCCATCAATTTTATGTGCAATGAAATATGGGATAAAGAGATGCAAACCTCAGGTGGATATTTGTGATATCTGTCTTAATCCTTATTATGTTGAGGACTTCCATTGCAATTCCTGCCACCGGACTTTTTCCTCAAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGAGACAAGTTATCCAAAGATATTTGTATTTTGGAATCATCACTTCCCTTGCGAACTAGATTGCTCAAGGTCCTGTTAGCTTGTATTGAGGTATCTGTTCTGCCTGAAGCATTTGGAACAATTTGGACAGATGATATTAGGAAGCATTGGGGTGTGAAGTTGAGCAATTCATCGTCCGTGGAGGAACTTTTACAGATATTGACCCTATTTGAAAGAGCATTACGGCGAGATTTTCTGTCATCAAACTTCTCTCCAACTGACGAATTGTTAGGCTCAAGCAGTGTGTCAGAAAATGCTGCAAATACTTGTTTTGATCCTGAATCAGTTGCTGTACTTCCATGGGTTCCACAAACCACTGCTGCTTTGTCTCTCAGGCTTTTTGAGATTGATTCATCCATCAGCTACGTAAAGCATGAGAGACCTGAGCCTTGCGAGGAGAAAGAAGTGAGAGAGTACATAAAGCTTCCTTCAAGATATACTCCGTTCAAATCTAATAGGGAGGTTGATCCAGCAGAATTTGACCATGATGAATTCATTAAAGATAAATCAGCTCCTAAGAAAATTGTACGAAGTGGCAATAAACGTGGACGAGGGACTAATGATCAAGGACGGGGTAAAAAGCTGTCTAAAAGAATGTACAATTCCAAGAGAGATACTGGCCGCCGAAATGTTAAGGTCACTGATAATCTAAGTCACAAACTAAAACAGCAGGGACAAGGTGGTGGGCGAGGCCGTCGAACTGTCAGGAAACGGAGAGTGGAAAAGAGAGCTGTTGAAGATTTGTTGCTGGGCCATACCGCGGCAGCCAGTTGTAGCTCCAAGATTGGTAGAGAACCATTAAGAAGAAGCTTGGATGAGGAATGGGATGGAGAAAAGACAAGCCCCATGACTCCTGTACACATTGGGGTTGCTGACAATAGTAATAGTGCTGAAGAGATGGAATCTGATGACAATGCTCAAGCAGTGGAATATCATCAAGGAGACTGGGAGGTAGGTTTTAATGGTGTCCCCCCCAACAGATGGAATAGGGATTCGGTTGGAATGAGTGATGAAGATGTGGATGCTTTTGAAGATGACAATGACAATGACAATGACAATGGCATTGAAGAGGAGGATTCAGAGGCAGATGTTATGAATGAGGGTTCAGATGGCATGCCAAATAGAGTAATAAATAATGTAGGAGGCTCTGACTCGGCTGTGTCTGACGATTCTTCTGATTAG 5289 0.4279 MEAEAASEAENNTQKRDDAGDNSNDNNNNGSSSRIVNSNEGQSKPKRQMKTPFQLETLEKAYALETYPSETMRAELSEKLGLSDRQLQMWFCHRRLKDKKDSSSKKPVVPAPPLPDSPTDDPRLGHEPGNDYGSGSGSGSSPFTRSELRNVMPGRGVPGYYESPQTIMELRAIACVEAQLGEPLREDGPILGVEFDSLPPDAFGAPIAVTEQQKRPSLAYDSKVYERHDARTNKAMARTFPEYPFLPNQSGIRSDAFGQLSQPHLHDPMEGPTRTPSFPLGIEQLPRIHATPSHSSRVRLLSQQDKQAILYPSPHRENDVSPQRESYTNIANTGMNSHFTDHPIVGQENPYVLPGGQVFHNDAVLPVLRMEKKRKSDDARVAREVEAYDIKIRKELEKQDNLRRKNEERLRKEMERQDRERRKEEERLMRERQREEERSKREQRREIERREKFLLKEHLRAEKKRQKEELRKEKESERRKAALEKATARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLRKPFAIQPWINSEQNVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGVNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEVYRQLALSAGFGPQLKKRSIAWSYPNDKDKGRSCEDIISTLRNGSAAESAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAFRKDPADAESILSEARKKIQIFENGFVAGEDADDVEREEESESDEVDEDPEDDDLLNPSTANQNLEQYDGTNICSSNMKEDLGHDVDLIQNEFDTDLPCFPENGSKDADCPSSVTGQPVACEGLNTGNLEEDNMEIDESKSGESWVQGLAEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLEASNALKKQMWAEAQIDKVRLKDDNINKSDFPSLIGNKVETQFTYPAVEGNQSPLLDININSIDNEASPSTAENQRDAPAAQSLPFEKSSLIQDLCAGTGPDNAQTQVPAQYSKRSRSQLKSYVAHLAEEMYVYRSLPLGQDRRRNRYWQCVASASSNDPGSGRIFVEYHDGKWRLIDSEEAFDVLLTSLDSRGIRESHLRLMLQKIENSFKENVRKNTQCAKIGSRGKVSIKNEANETYPFPDRNAGSDSPSSTLHGLNSDSSETSSSFKIELGKSEVEKKDALRRYQEFQKWMRKECYNPSILCAMKYGIKRCKPQVDICDICLNPYYVEDFHCNSCHRTFSSNNGFNFSKHAFQCGDKLSKDICILESSLPLRTRLLKVLLACIEVSVLPEAFGTIWTDDIRKHWGVKLSNSSSVEELLQILTLFERALRRDFLSSNFSPTDELLGSSSVSENAANTCFDPESVAVLPWVPQTTAALSLRLFEIDSSISYVKHERPEPCEEKEVREYIKLPSRYTPFKSNREVDPAEFDHDEFIKDKSAPKKIVRSGNKRGRGTNDQGRGKKLSKRMYNSKRDTGRRNVKVTDNLSHKLKQQGQGGGRGRRTVRKRRVEKRAVEDLLLGHTAAASCSSKIGREPLRRSLDEEWDGEKTSPMTPVHIGVADNSNSAEEMESDDNAQAVEYHQGDWEVGFNGVPPNRWNRDSVGMSDEDVDAFEDDNDNDNDNGIEEEDSEADVMNEGSDGMPNRVINNVGGSDSAVSDDSSD 1762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1538 1609 - -
Gabi4083g00058 1762 Gene3D - 28 104 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1 54 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1741 1762 - -
Gabi4083g00058 1762 SMART HOX_1 43 105 IPR001356 GO:0003677
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 23 50 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 839 887 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1553 1585 - -
Gabi4083g00058 1762 Pfam Homeodomain 44 100 IPR001356 GO:0003677
Gabi4083g00058 1762 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1133 1205 IPR028941 -
Gabi4083g00058 1762 Pfam DDT domain 562 616 IPR018501 -
Gabi4083g00058 1762 CDD homeodomain 46 95 IPR001356 GO:0003677
Gabi4083g00058 1762 SUPERFAMILY Homeodomain-like 30 100 IPR009057 -
Gabi4083g00058 1762 ProSiteProfiles 'Homeobox' domain profile. 41 101 IPR001356 GO:0003677
Gabi4083g00058 1762 SMART testlast3 560 619 IPR018501 -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1664 1762 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1242 1266 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1707 1734 - -
Gabi4083g00058 1762 Coils Coil 456 487 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 133 147 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 867 887 - -
Gabi4083g00058 1762 Pfam HB1, ASXL, restriction endonuclease HTH domain 742 810 IPR007759 GO:0006355
Gabi4083g00058 1762 Coils Coil 396 450 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 411 443 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 1233 1266 - -
Gabi4083g00058 1762 ProSiteProfiles DDT domain profile. 560 619 IPR018501 -
Gabi4083g00058 1762 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 29 1762 IPR044977 GO:0006357
Gabi4083g00058 1762 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 952 995 IPR028942 -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 843 866 - -
Gabi4083g00058 1762 MobiDBLite consensus disorder prediction 98 150 - -
Gabi4083g00058 1762 ProSiteProfiles HARE-type HTH domain profile. 742 811 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00058 Gabi-Chr4083 423996 434159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00058 37 1690 Homeobox Transcription Factor Family AT1G28420 48.947 0.0 1337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gabi4083g00058 WSD 2.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00058 - - gmx:100777465 2644.38