Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00036 ATGGCACCTAGGGATAAGACAGGTGGCGTTAAGGGGAACGGCAACCGTAACGGCGGCGTGAAAGAGGTGCATTTTCGGGGAGTGAGGAAACGACCGTGGGGGAGATACGCCGCCGAGATCAGAGATCCAGGCAAGAAGAGCCGCGTCTGGCTCGGCACCTTCGACACGGCGGAAGAGGCAGCGCGAGCCTATGACGCCGCCGCCCGCGATTTCCGTGGCCCTAAGGCCAAGACCAACTTCCCTCTCCTTTCTGAGAATGTCAAGAACCAGAGCCCCAGCCAGAGCAGCACCGTTGAGTCCTCCAGCCGCGACCGCGACTCCGCCGCTGTCGTCGCTGATTCGTCGCCGCTTGACCTCAACTTGGCCCCCGCCGTTGCCGGCTCCGTACGGTTCCCCTTCCAGCATCAGTTCCCTCCGCCCGCCATGGTATTTCCCGGCATGATGCCGGCGGCGAACCAGGTTTTGTACTTCGATGCTGTCCTGCGCGCCGGCATGGTGGCTCACCGTCCGTACCAACAACGCTTCGGGTTCAACCAACCCGCGTTGGCGAGTGAGTTCCACGGAGCCCAAAGCGACTCGGATTCATCCTCGGTGATCGATCTGAACCACCATGAAGGCAATCATGAGGGTGGTAGAGGCTTGGATCTGGACCTTAACTACCCTCCTCCAGCTTGA 675 0.6119 MAPRDKTGGVKGNGNRNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARDFRGPKAKTNFPLLSENVKNQSPSQSSTVESSSRDRDSAAVVADSSPLDLNLAPAVAGSVRFPFQHQFPPPAMVFPGMMPAANQVLYFDAVLRAGMVAHRPYQQRFGFNQPALASEFHGAQSDSDSSSVIDLNHHEGNHEGGRGLDLDLNYPPPA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00036 224 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Gabi4083g00036 224 MobiDBLite consensus disorder prediction 198 212 - -
Gabi4083g00036 224 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Gabi4083g00036 224 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Gabi4083g00036 224 MobiDBLite consensus disorder prediction 86 108 - -
Gabi4083g00036 224 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Gabi4083g00036 224 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Gabi4083g00036 224 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Gabi4083g00036 224 MobiDBLite consensus disorder prediction 1 26 - -
Gabi4083g00036 224 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Gabi4083g00036 224 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Gabi4083g00036 224 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Gabi4083g00036 224 MobiDBLite consensus disorder prediction 186 224 - -
Gabi4083g00036 224 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00036 Gabi-Chr4083 327312 328479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00036 21 102 AP2-EREBP Transcription Factor Family AT3G15210 71.910 3.92e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi4083g00036 AP2 4.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00036 K09286 - gmx:100170742 287.345