Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00035 ATGGCGTCTTCGTCTTCTTCGGCTTCTCGCGAGGGACACTACAGAGGGGTTAGGAAGCGACCATGGGGACGCTACGCAGCTGAGATACGCGATCCTTGGAAGAAGACTCGTGTTTGGTTGGGTACATTTGATACTCCTGAGGAGGCTGCGCTTGCATACGACGGCGCCGCTCGTTCCCTCCGCGGTGCCAAGGCTAAAACAAACTTTCCTCCGGCGCCGGTTGCCGCCGCTGGCCTCTGCCTCGACCTCAACGTCCCTTCCTCTGATCACCGCTGGCCCTCCGTCCCTTCCCGCAGTCTCGTCCTCAGTGAGTTTCTTCACACCGCTGGTCCTCCACCTCAGCCTCCTCCTGCTGCGGTGGCCAGTCACAGGCGCATCGACGGCGCTGTTGCTGTTGGCGGTGGAGCACAGATGGTGGAGAGTTCCCCGACGGCGTCGTTTCTGGGACTCATTCGGCGCGGGATTCCCATCGACTTGAACGAACCTCCACCCTTGTGGCTATAG 504 0.6091 MASSSSSASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPAPVAAAGLCLDLNVPSSDHRWPSVPSRSLVLSEFLHTAGPPPQPPPAAVASHRRIDGAVAVGGGAQMVESSPTASFLGLIRRGIPIDLNEPPPLWL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00035 167 FunFam Ethylene-responsive transcription factor 2 13 71 - -
Gabi4083g00035 167 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Gabi4083g00035 167 SUPERFAMILY DNA-binding domain 13 70 IPR016177 GO:0003677
Gabi4083g00035 167 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
Gabi4083g00035 167 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Gabi4083g00035 167 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Gabi4083g00035 167 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Gabi4083g00035 167 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Gabi4083g00035 167 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Gabi4083g00035 167 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00035 Gabi-Chr4083 305022 305655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00035 4 167 AP2-EREBP Transcription Factor Family AT1G28360 48.768 2.03e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi4083g00035 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00035 - - gmx:100798369 265.388