Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00022 ATGGAACAAGAAGGAGGTGGAGAAGGAGGTGACATCAATAAACCACCTCAGGTTCAGCCTCAGCCTCAGCCTCAGCCTCAGCAACCACAGAAGTGTCCTCGCTGTGATTCTCTCAACACCAAGTTCTGCTATTACAATAACTATAGCTTGTCACAGCCTCGTTACTACTGCAAAACATGCAGAAGGTACTGGACACAAGGTGGAACCTTGAGGAACGTACCCGTTGGTGGTGGTTGCCGTAAGGGTAAGCGCGCCAAAACTTCTTCATCTTCCTCTGAGAATTCTTCTTCCCCGTCGCATCCACAACCACCACTACCACCACCGCCGCAAGAGGTGGTCCAAGCCCAGCCAAACTTGACAACGTTGGCGAGGGCTAACGACCTTTCTTCAACCATGGCTTCCCTTCCCGCGACGGTTCCATCCACCGTCGTTCCCTTTTATCAAGGAGGTGGTGTTGGTGTTGGTGTTGGTGGTGTTGGTTACTTGTCTTCTCTGGCAGCGATTCATTCAATGAACCAATCACATCCTTTTGATCCGTCTCTGAATGTTGGGGGTGATGTTCGTTCTTCTAATTTGGGTCTTCTTTCTGCTTTCAATGCTGCTTCTCTTGGCTCCCAACTTCAAATTCGTGATCCATCGCAATTCTATCAGATGGGTAACAGAGAAAGGGAGATAGAGTCTCTGTATACAGCACAACAAGGTTTAATTCCATCTAGCATGGCTAATACTAGTGCTGCTTCTCAATCTCAACATGATTGGCCTCGTAGCTTCATCAATAATGCTAGTGATAGACCCTCTGGTTCCTCTTTGTGGAGCACTGCTGTCAGCAGCACCACTTCCATTAGTGGTAACTCTGAGAGGATGCCTAGTTCTGGTTCTTCTTCTTTGGTCCAAAATCAGTGGCCTAATCTTCCAGGTTATGGGTCTCCTCCGTGA 936 0.4829 MEQEGGGEGGDINKPPQVQPQPQPQPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYYCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKTSSSSSENSSSPSHPQPPLPPPPQEVVQAQPNLTTLARANDLSSTMASLPATVPSTVVPFYQGGGVGVGVGGVGYLSSLAAIHSMNQSHPFDPSLNVGGDVRSSNLGLLSAFNAASLGSQLQIRDPSQFYQMGNREREIESLYTAQQGLIPSSMANTSAASQSQHDWPRSFINNASDRPSGSSLWSTAVSSTTSISGNSERMPSSGSSSLVQNQWPNLPGYGSPP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00022 311 MobiDBLite consensus disorder prediction 240 304 - -
Gabi4083g00022 311 MobiDBLite consensus disorder prediction 71 112 - -
Gabi4083g00022 311 MobiDBLite consensus disorder prediction 1 33 - -
Gabi4083g00022 311 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Gabi4083g00022 311 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 222 IPR045174 GO:0003700|GO:0006355
Gabi4083g00022 311 MobiDBLite consensus disorder prediction 240 311 - -
Gabi4083g00022 311 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Gabi4083g00022 311 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Gabi4083g00022 311 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00022 Gabi-Chr4083 191346 192696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00022 15 92 C2C2-Dof Transcription Factor Family AT5G60200 67.949 4.03e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi4083g00022 zf-Dof 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00022 - - gmx:102668884 297.36